Gene info for mRNA_6808 in Rhodosporidium toruloides IFO0880

Name: 15176
Annotation: K12856 PRPF8, PRP8 pre-mRNA-processing factor 8
Type 1: Protein-coding gene
Located on scaffold scaffold_7, + strand, nucleotides 182,860 to 191,504
See nucleotide sequence around mRNA_6808 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15171 and 15172 are separated by 173 nucleotides15172 and 15173 are separated by 118 nucleotides15173 and 15174 are separated by 655 nucleotides15174 and 15175 are separated by 423 nucleotides15175 and 15176 are separated by 586 nucleotides15176 and 15177 are separated by 367 nucleotides15177 and 15178 are separated by 352 nucleotides15178 and 15179 are separated by 241 nucleotides15179 and 15180 are separated by 284 nucleotides15180 and 15181 are separated by 451 nucleotides mRNA_6803: 15171 - KOG3131 Uncharacterized conserved protein, at 172,404 to 173,557 15171 mRNA_6804: 15172 - HMMPfam-CFEM domain-PF05730, at 173,731 to 174,873 15172 mRNA_6805: 15173 - Hypothetical Protein, at 174,992 to 176,183 15173 mRNA_6806: 15174 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 176,839 to 177,908 15174 mRNA_6807: 15175 - HMMPfam-GRIP domain-PF01465,ProSiteProfiles-GRIP domain profile.-PS50913,SMART-golgin-97, RanBP2alpha,Imh1p and p230/golgin-245-SM00755, at 178,332 to 182,273 15175 mRNA_6808: 15176 - K12856 PRPF8, PRP8 pre-mRNA-processing factor 8, at 182,860 to 191,504 15176 mRNA_6809: 15177 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 191,872 to 193,044 15177 mRNA_6810: 15178 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 193,397 to 194,230 15178 mRNA_6811: 15179 - K03953 NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9, at 194,472 to 196,083 15179 mRNA_6812: 15180 - K00074 paaH, hbd, fadB, mmgB 3-hydroxybutyryl-CoA dehydrogenase, at 196,368 to 197,656 15180 mRNA_6813: 15181 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 198,108 to 198,984 15181
Locus Name Description Strand Phenotype
mRNA_6803 15171 KOG3131 Uncharacterized conserved protein - cofit
mRNA_6804 15172 HMMPfam-CFEM domain-PF05730 + cofit
mRNA_6805 15173 Hypothetical Protein - cofit
mRNA_6806 15174 BLAST putative protein [Melanopsichium pennsylvanicum 4] - no data
mRNA_6807 15175 HMMPfam-GRIP domain-PF01465,ProSiteProfiles-GRIP domain profile.-PS50913,SMART-golgin-97, RanBP2alpha,Imh1p and p230/golgin-245-SM00755 + cofit
mRNA_6808 15176 K12856 PRPF8, PRP8 pre-mRNA-processing factor 8 + cofit
mRNA_6809 15177 HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383 + cofit
mRNA_6810 15178 HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729 - cofit
mRNA_6811 15179 K03953 NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9 + no data
mRNA_6812 15180 K00074 paaH, hbd, fadB, mmgB 3-hydroxybutyryl-CoA dehydrogenase - cofit
mRNA_6813 15181 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 - cofit

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