Gene info for mRNA_6871 in Rhodosporidium toruloides IFO0880

Name: 15239
Annotation: K17600 VPS54 vacuolar protein sorting-associated protein 54
Type 1: Protein-coding gene
Located on scaffold scaffold_7, - strand, nucleotides 319,945 to 325,501
See nucleotide sequence around mRNA_6871 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15234 and 15235 are separated by 130 nucleotides15235 and 15236 are separated by 44 nucleotides15236 and 15237 are separated by 682 nucleotides15237 and 15238 are separated by 47 nucleotides15238 and 15239 are separated by 179 nucleotides15239 and 15240 are separated by 175 nucleotides15240 and 15241 are separated by 230 nucleotides15241 and 15242 are separated by 80 nucleotides15242 and 15243 are separated by 271 nucleotides15243 and 15244 are separated by 478 nucleotides mRNA_6866: 15234 - Hypothetical Protein, at 309,366 to 310,327 15234 mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310,458 to 312,954 15235 mRNA_6868: 15236 - Hypothetical Protein, at 312,999 to 313,640 15236 mRNA_6869: 15237 - K06125 COQ2 4-hydroxybenzoate polyprenyltransferase, at 314,323 to 315,416 15237 mRNA_6870: 15238 - K08736 MSH3 DNA mismatch repair protein MSH3, at 315,464 to 319,765 15238 mRNA_6871: 15239 - K17600 VPS54 vacuolar protein sorting-associated protein 54, at 319,945 to 325,501 15239 mRNA_6872: 15240 - KOG3035 Isoamyl acetate-hydrolyzing esterase, at 325,677 to 326,693 15240 mRNA_6873: 15241 - K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase, at 326,924 to 328,423 15241 mRNA_6874: 15242 - BLAST similar to An13g00570 [Aspergillus niger], at 328,504 to 329,604 15242 mRNA_6875: 15243 - K10563 mutM, fpg formamidopyrimidine-DNA glycosylase, at 329,876 to 331,485 15243 mRNA_6876: 15244 - Hypothetical Protein, at 331,964 to 333,369 15244
Locus Name Description Strand Phenotype
mRNA_6866 15234 Hypothetical Protein + cofit
mRNA_6867 15235 KOG4121 Nuclear pore complex, Nup133 component (sc Nup133) - cofit
mRNA_6868 15236 Hypothetical Protein - cofit
mRNA_6869 15237 K06125 COQ2 4-hydroxybenzoate polyprenyltransferase + no data
mRNA_6870 15238 K08736 MSH3 DNA mismatch repair protein MSH3 - cofit
mRNA_6871 15239 K17600 VPS54 vacuolar protein sorting-associated protein 54 - cofit
mRNA_6872 15240 KOG3035 Isoamyl acetate-hydrolyzing esterase + cofit
mRNA_6873 15241 K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase - cofit
mRNA_6874 15242 BLAST similar to An13g00570 [Aspergillus niger] + cofit
mRNA_6875 15243 K10563 mutM, fpg formamidopyrimidine-DNA glycosylase - cofit
mRNA_6876 15244 Hypothetical Protein + cofit

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