Gene info for mRNA_6909 in Rhodosporidium toruloides IFO0880

Name: 15277
Annotation: K14315 NDC1, TMEM48 nucleoporin NDC1
Type 1: Protein-coding gene
Located on scaffold scaffold_7, - strand, nucleotides 408,529 to 411,391
See nucleotide sequence around mRNA_6909 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15272 and 15273 are separated by 235 nucleotides15273 and 15274 are separated by 346 nucleotides15274 and 15275 are separated by 159 nucleotides15275 and 15276 are separated by 570 nucleotides15276 and 15277 are separated by 231 nucleotides15277 and 15278 are separated by 337 nucleotides15278 and 15279 are separated by 660 nucleotides15279 and 15280 are separated by 237 nucleotides15280 and 15281 are separated by 1494 nucleotides15281 and 15282 are separated by 715 nucleotides mRNA_6904: 15272 - HMMPfam-CTLH/CRA C-terminal to LisH motif domain-PF10607,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-CT11-RanBPM-SM00757, at 395,182 to 396,886 15272 mRNA_6905: 15273 - K14300 NUP133 nuclear pore complex protein Nup133, at 397,122 to 402,305 15273 mRNA_6906: 15274 - Hypothetical Protein, at 402,652 to 403,078 15274 mRNA_6907: 15275 - K14016 UFD1 ubiquitin fusion degradation protein 1, at 403,238 to 404,908 15275 mRNA_6908: 15276 - K01907 AACS, acsA acetoacetyl-CoA synthetase, at 405,479 to 408,297 15276 mRNA_6909: 15277 - K14315 NDC1, TMEM48 nucleoporin NDC1, at 408,529 to 411,391 15277 mRNA_6910: 15278 - KOG2287 Galactosyltransferases, at 411,729 to 414,888 15278 mRNA_6911: 15279 - K03660 OGG1 N-glycosylase/DNA lyase, at 415,549 to 417,203 15279 mRNA_6912: 15280 - K12833 SF3B14 pre-mRNA branch site protein p14, at 417,441 to 418,066 15280 mRNA_6913: 15281 - Hypothetical Protein, at 419,561 to 420,635 15281 mRNA_6914: 15282 - KOG0254 Predicted transporter (major facilitator superfamily), at 421,351 to 423,576 15282
Locus Name Description Strand Phenotype
mRNA_6904 15272 HMMPfam-CTLH/CRA C-terminal to LisH motif domain-PF10607,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-CT11-RanBPM-SM00757 - cofit
mRNA_6905 15273 K14300 NUP133 nuclear pore complex protein Nup133 + cofit
mRNA_6906 15274 Hypothetical Protein + no data
mRNA_6907 15275 K14016 UFD1 ubiquitin fusion degradation protein 1 - no data
mRNA_6908 15276 K01907 AACS, acsA acetoacetyl-CoA synthetase - cofit
mRNA_6909 15277 K14315 NDC1, TMEM48 nucleoporin NDC1 - insig.
mRNA_6910 15278 KOG2287 Galactosyltransferases - no data
mRNA_6911 15279 K03660 OGG1 N-glycosylase/DNA lyase + insig.
mRNA_6912 15280 K12833 SF3B14 pre-mRNA branch site protein p14 - no data
mRNA_6913 15281 Hypothetical Protein + insig.
mRNA_6914 15282 KOG0254 Predicted transporter (major facilitator superfamily) - cofit

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