Gene info for mRNA_6954 in Rhodosporidium toruloides IFO0880

Name: 15322
Annotation: K10591 NEDD4, RSP5 E3 ubiquitin-protein ligase NEDD4
Type 1: Protein-coding gene
Located on scaffold scaffold_7, + strand, nucleotides 519,193 to 522,362
See nucleotide sequence around mRNA_6954 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15317 and 15318 are separated by 1022 nucleotides15318 and 15319 are separated by 586 nucleotides15319 and 15320 are separated by 280 nucleotides15320 and 15321 are separated by 128 nucleotides15321 and 15322 are separated by 410 nucleotides15322 and 15323 are separated by 652 nucleotides15323 and 15324 are separated by 507 nucleotides15324 and 15325 are separated by 113 nucleotides15325 and 15326 are separated by 1350 nucleotides15326 and 15327 are separated by 309 nucleotides mRNA_6949: 15317 - HMMPfam-Cenp-O kinetochore centromere component-PF09496, at 506,847 to 507,636 15317 mRNA_6950: 15318 - KOG4505 Na+/H+ antiporter, at 508,659 to 510,404 15318 mRNA_6951: 15319 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 510,991 to 511,843 15319 mRNA_6952: 15320 - K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48, at 512,124 to 517,290 15320 mRNA_6953: 15321 - K13719 OTU1, YOD1 ubiquitin thioesterase OTU1, at 517,419 to 518,782 15321 mRNA_6954: 15322 - K10591 NEDD4, RSP5 E3 ubiquitin-protein ligase NEDD4, at 519,193 to 522,362 15322 mRNA_6955: 15323 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 523,015 to 527,499 15323 mRNA_6956: 15324 - K00720 UGCG ceramide glucosyltransferase, at 528,007 to 529,680 15324 mRNA_6957: 15325 - K13100 CWC22 pre-mRNA-splicing factor CWC22, at 529,794 to 532,653 15325 mRNA_6958: 15326 - K09238 ACE2 metallothionein expression activator, at 534,004 to 536,795 15326 mRNA_6959: 15327 - K14805 DDX24, MAK5 ATP-dependent RNA helicase DDX24/MAK5, at 537,105 to 540,222 15327
Locus Name Description Strand Phenotype
mRNA_6949 15317 HMMPfam-Cenp-O kinetochore centromere component-PF09496 + cofit
mRNA_6950 15318 KOG4505 Na+/H+ antiporter + strong
mRNA_6951 15319 ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065 + cofit
mRNA_6952 15320 K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48 - cofit
mRNA_6953 15321 K13719 OTU1, YOD1 ubiquitin thioesterase OTU1 + insig.
mRNA_6954 15322 K10591 NEDD4, RSP5 E3 ubiquitin-protein ligase NEDD4 + no data
mRNA_6955 15323 ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616 + cofit
mRNA_6956 15324 K00720 UGCG ceramide glucosyltransferase - cofit
mRNA_6957 15325 K13100 CWC22 pre-mRNA-splicing factor CWC22 + no data
mRNA_6958 15326 K09238 ACE2 metallothionein expression activator + strong
mRNA_6959 15327 K14805 DDX24, MAK5 ATP-dependent RNA helicase DDX24/MAK5 - no data

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