Gene info for mRNA_7106 in Rhodosporidium toruloides IFO0880

Name: 15474
Annotation: K11313 SUPT3H, SPT3 transcription initiation protein SPT3
Type 1: Protein-coding gene
Located on scaffold scaffold_7, - strand, nucleotides 895,700 to 897,201
See nucleotide sequence around mRNA_7106 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15469 and 15470 are separated by 454 nucleotides15470 and 15471 are separated by 1249 nucleotides15471 and 15472 are separated by 552 nucleotides15472 and 15473 are separated by 422 nucleotides15473 and 15474 are separated by 87 nucleotides15474 and 15475 are separated by 214 nucleotides15475 and 15476 are separated by 136 nucleotides15476 and 15477 are separated by 323 nucleotides15477 and 15478 are separated by 370 nucleotides15478 and 15479 are separated by 280 nucleotides mRNA_7101: 15469 - K08968 E1.8.4.14 L-methionine (R)-S-oxide reductase, at 881,719 to 882,426 15469 mRNA_7102: 15470 - K03441 GLP-F aquaglyceroporin related protein, other eukaryote, at 882,881 to 885,755 15470 mRNA_7103: 15471 - Hypothetical Protein, at 887,005 to 887,880 15471 mRNA_7104: 15472 - K09448 TEAD transcriptional enhancer factor, at 888,433 to 891,786 15472 mRNA_7105: 15473 - KOG1890 Phosphoinositide phosphatase SAC1, at 892,209 to 895,612 15473 mRNA_7106: 15474 - K11313 SUPT3H, SPT3 transcription initiation protein SPT3, at 895,700 to 897,201 15474 mRNA_7107: 15475 - KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain, at 897,416 to 899,091 15475 mRNA_7108: 15476 - HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296, at 899,228 to 903,559 15476 mRNA_7109: 15477 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 903,883 to 906,158 15477 mRNA_7110: 15478 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 906,529 to 908,168 15478 mRNA_7111: 15479 - Interpro Subunit 11 of the general transcription factor TFIIH, at 908,449 to 909,688 15479
Locus Name Description Strand Phenotype
mRNA_7101 15469 K08968 E1.8.4.14 L-methionine (R)-S-oxide reductase - cofit
mRNA_7102 15470 K03441 GLP-F aquaglyceroporin related protein, other eukaryote + insig.
mRNA_7103 15471 Hypothetical Protein + cofit
mRNA_7104 15472 K09448 TEAD transcriptional enhancer factor - cofit
mRNA_7105 15473 KOG1890 Phosphoinositide phosphatase SAC1 + cofit
mRNA_7106 15474 K11313 SUPT3H, SPT3 transcription initiation protein SPT3 - insig.
mRNA_7107 15475 KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain + cofit
mRNA_7108 15476 HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296 - cofit
mRNA_7109 15477 HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562 - insig.
mRNA_7110 15478 HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735 - cofit
mRNA_7111 15479 Interpro Subunit 11 of the general transcription factor TFIIH - cofit

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