Gene info for mRNA_7110 in Rhodosporidium toruloides IFO0880

Name: 15478
Annotation: HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735
Type 1: Protein-coding gene
Located on scaffold scaffold_7, - strand, nucleotides 906,529 to 908,168
See nucleotide sequence around mRNA_7110 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15473 and 15474 are separated by 87 nucleotides15474 and 15475 are separated by 214 nucleotides15475 and 15476 are separated by 136 nucleotides15476 and 15477 are separated by 323 nucleotides15477 and 15478 are separated by 370 nucleotides15478 and 15479 are separated by 280 nucleotides15479 and 15480 are separated by 399 nucleotides15480 and 15481 are separated by 211 nucleotides15481 and 15482 are separated by 889 nucleotides15482 and 15483 are separated by 637 nucleotides mRNA_7105: 15473 - KOG1890 Phosphoinositide phosphatase SAC1, at 892,209 to 895,612 15473 mRNA_7106: 15474 - K11313 SUPT3H, SPT3 transcription initiation protein SPT3, at 895,700 to 897,201 15474 mRNA_7107: 15475 - KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain, at 897,416 to 899,091 15475 mRNA_7108: 15476 - HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296, at 899,228 to 903,559 15476 mRNA_7109: 15477 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 903,883 to 906,158 15477 mRNA_7110: 15478 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 906,529 to 908,168 15478 mRNA_7111: 15479 - Interpro Subunit 11 of the general transcription factor TFIIH, at 908,449 to 909,688 15479 mRNA_7112: 15480 - Interpro DNA-directed RNA polymerase I subunit RPA34.5 0, at 910,088 to 911,391 15480 mRNA_7113: 15481 - Hypothetical Protein, at 911,603 to 912,181 15481 mRNA_7114: 15482 - K00383 GSR, gor glutathione reductase (NADPH), at 913,071 to 914,998 15482 mRNA_7115: 15483 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 915,636 to 918,075 15483
Locus Name Description Strand Phenotype
mRNA_7105 15473 KOG1890 Phosphoinositide phosphatase SAC1 + cofit
mRNA_7106 15474 K11313 SUPT3H, SPT3 transcription initiation protein SPT3 - insig.
mRNA_7107 15475 KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain + cofit
mRNA_7108 15476 HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296 - cofit
mRNA_7109 15477 HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562 - insig.
mRNA_7110 15478 HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735 - cofit
mRNA_7111 15479 Interpro Subunit 11 of the general transcription factor TFIIH - cofit
mRNA_7112 15480 Interpro DNA-directed RNA polymerase I subunit RPA34.5 0 + cofit
mRNA_7113 15481 Hypothetical Protein - cofit
mRNA_7114 15482 K00383 GSR, gor glutathione reductase (NADPH) - no data
mRNA_7115 15483 K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH) - strong

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