Gene info for mRNA_7160 in Rhodosporidium toruloides IFO0880

Name: 15528
Annotation: HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
Type 1: Protein-coding gene
Located on scaffold scaffold_7, + strand, nucleotides 1,019,624 to 1,022,322
See nucleotide sequence around mRNA_7160 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15523 and 15524 are separated by 2502 nucleotides15524 and 15525 are separated by 867 nucleotides15525 and 15526 are separated by 180 nucleotides15526 and 15527 are separated by 138 nucleotides15527 and 15528 are separated by 242 nucleotides15528 and 15529 are separated by 270 nucleotides15529 and 15530 are separated by 1059 nucleotides15530 and 15531 are separated by 175 nucleotides15531 and 15532 are separated by 141 nucleotides15532 and 15533 are separated by 114 nucleotides mRNA_7155: 15523 - Hypothetical Protein, at 1,007,803 to 1,008,291 15523 mRNA_7156: 15524 - K20102 YTHDF YTH domain-containing family protein, at 1,010,794 to 1,011,457 15524 mRNA_7157: 15525 - KOG2936 Uncharacterized conserved protein, at 1,012,325 to 1,013,982 15525 mRNA_7158: 15526 - K09529 DNAJC9 DnaJ homolog subfamily C member 9, at 1,014,163 to 1,016,901 15526 mRNA_7159: 15527 - HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,017,040 to 1,019,381 15527 mRNA_7160: 15528 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,019,624 to 1,022,322 15528 mRNA_7161: 15529 - Hypothetical Protein, at 1,022,593 to 1,024,140 15529 mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1,025,200 to 1,027,264 15530 mRNA_7163: 15531 - Hypothetical Protein, at 1,027,440 to 1,028,287 15531 mRNA_7164: 15532 - K13117 DHX35 ATP-dependent RNA helicase DDX35, at 1,028,429 to 1,031,367 15532 mRNA_7165: 15533 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 1,031,482 to 1,033,004 15533
Locus Name Description Strand Phenotype
mRNA_7155 15523 Hypothetical Protein - cofit
mRNA_7156 15524 K20102 YTHDF YTH domain-containing family protein + cofit
mRNA_7157 15525 KOG2936 Uncharacterized conserved protein + cofit
mRNA_7158 15526 K09529 DNAJC9 DnaJ homolog subfamily C member 9 - cofit
mRNA_7159 15527 HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 + cofit
mRNA_7160 15528 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 + cofit
mRNA_7161 15529 Hypothetical Protein - cofit
mRNA_7162 15530 ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103 - cofit
mRNA_7163 15531 Hypothetical Protein - insig.
mRNA_7164 15532 K13117 DHX35 ATP-dependent RNA helicase DDX35 - insig.
mRNA_7165 15533 K01867 WARS, trpS tryptophanyl-tRNA synthetase + no data

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