Gene info for mRNA_7163 in Rhodosporidium toruloides IFO0880

Name: 15531
Annotation: Hypothetical Protein
Type 1: Protein-coding gene
Located on scaffold scaffold_7, - strand, nucleotides 1,027,440 to 1,028,287
See nucleotide sequence around mRNA_7163 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15526 and 15527 are separated by 138 nucleotides15527 and 15528 are separated by 242 nucleotides15528 and 15529 are separated by 270 nucleotides15529 and 15530 are separated by 1059 nucleotides15530 and 15531 are separated by 175 nucleotides15531 and 15532 are separated by 141 nucleotides15532 and 15533 are separated by 114 nucleotides15533 and 15534 are separated by 152 nucleotides15534 and 15535 are separated by 177 nucleotides15535 and 15536 are separated by 192 nucleotides mRNA_7158: 15526 - K09529 DNAJC9 DnaJ homolog subfamily C member 9, at 1,014,163 to 1,016,901 15526 mRNA_7159: 15527 - HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,017,040 to 1,019,381 15527 mRNA_7160: 15528 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,019,624 to 1,022,322 15528 mRNA_7161: 15529 - Hypothetical Protein, at 1,022,593 to 1,024,140 15529 mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1,025,200 to 1,027,264 15530 mRNA_7163: 15531 - Hypothetical Protein, at 1,027,440 to 1,028,287 15531 mRNA_7164: 15532 - K13117 DHX35 ATP-dependent RNA helicase DDX35, at 1,028,429 to 1,031,367 15532 mRNA_7165: 15533 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 1,031,482 to 1,033,004 15533 mRNA_7166: 15534 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 1,033,157 to 1,035,237 15534 mRNA_7167: 15535 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1,035,415 to 1,036,383 15535 mRNA_7168: 15536 - HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1,036,576 to 1,038,409 15536
Locus Name Description Strand Phenotype
mRNA_7158 15526 K09529 DNAJC9 DnaJ homolog subfamily C member 9 - cofit
mRNA_7159 15527 HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 + cofit
mRNA_7160 15528 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 + cofit
mRNA_7161 15529 Hypothetical Protein - cofit
mRNA_7162 15530 ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103 - cofit
mRNA_7163 15531 Hypothetical Protein - insig.
mRNA_7164 15532 K13117 DHX35 ATP-dependent RNA helicase DDX35 - insig.
mRNA_7165 15533 K01867 WARS, trpS tryptophanyl-tRNA synthetase + no data
mRNA_7166 15534 K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase + cofit
mRNA_7167 15535 ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103 - insig.
mRNA_7168 15536 HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978 - insig.

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