Gene info for mRNA_7173 in Rhodosporidium toruloides IFO0880

Name: 15541
Annotation: K02891 RP-L22e, RPL22 large subunit ribosomal protein L22e
Type 1: Protein-coding gene
Located on scaffold scaffold_7, - strand, nucleotides 1,049,692 to 1,050,738
See nucleotide sequence around mRNA_7173 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15536 and 15537 are separated by 256 nucleotides15537 and 15538 are separated by 254 nucleotides15538 and 15539 are separated by 254 nucleotides15539 and 15540 are separated by 628 nucleotides15540 and 15541 are separated by 320 nucleotides15541 and 15542 are separated by 392 nucleotides15542 and 15543 are separated by 419 nucleotides15543 and 15544 are separated by 220 nucleotides15544 and 15545 are separated by 284 nucleotides15545 and 15546 are separated by 172 nucleotides mRNA_7168: 15536 - HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1,036,576 to 1,038,409 15536 mRNA_7169: 15537 - K13137 STRAP, UNRIP serine-threonine kinase receptor-associated protein, at 1,038,666 to 1,040,206 15537 mRNA_7170: 15538 - Hypothetical Protein, at 1,040,461 to 1,043,299 15538 mRNA_7171: 15539 - Hypothetical Protein, at 1,043,554 to 1,044,696 15539 mRNA_7172: 15540 - K01408 IDE, ide insulysin, at 1,045,325 to 1,049,371 15540 mRNA_7173: 15541 - K02891 RP-L22e, RPL22 large subunit ribosomal protein L22e, at 1,049,692 to 1,050,738 15541 mRNA_7174: 15542 - K11131 DKC1, NOLA4, CBF5 H/ACA ribonucleoprotein complex subunit 4, at 1,051,131 to 1,053,156 15542 mRNA_7175: 15543 - K12272 SRPRB, SRP102 signal recognition particle receptor subunit beta, at 1,053,576 to 1,055,087 15543 mRNA_7176: 15544 - KOG4635 Vacuolar import and degradation protein, at 1,055,308 to 1,056,885 15544 mRNA_7177: 15545 - KOG0565 Inositol polyphosphate 5-phosphatase and related proteins, at 1,057,170 to 1,058,665 15545 mRNA_7178: 15546 - KOG0417 Ubiquitin-protein ligase, at 1,058,838 to 1,059,935 15546
Locus Name Description Strand Phenotype
mRNA_7168 15536 HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978 - insig.
mRNA_7169 15537 K13137 STRAP, UNRIP serine-threonine kinase receptor-associated protein - cofit
mRNA_7170 15538 Hypothetical Protein + cofit
mRNA_7171 15539 Hypothetical Protein - cofit
mRNA_7172 15540 K01408 IDE, ide insulysin + cofit
mRNA_7173 15541 K02891 RP-L22e, RPL22 large subunit ribosomal protein L22e - no data
mRNA_7174 15542 K11131 DKC1, NOLA4, CBF5 H/ACA ribonucleoprotein complex subunit 4 + no data
mRNA_7175 15543 K12272 SRPRB, SRP102 signal recognition particle receptor subunit beta + no data
mRNA_7176 15544 KOG4635 Vacuolar import and degradation protein + cofit
mRNA_7177 15545 KOG0565 Inositol polyphosphate 5-phosphatase and related proteins + cofit
mRNA_7178 15546 KOG0417 Ubiquitin-protein ligase - cofit

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