Gene info for mRNA_7220 in Rhodosporidium toruloides IFO0880

Name: 15588
Annotation: HMMPfam-zinc-RING finger domain-PF14634,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850
Type 1: Protein-coding gene
Located on scaffold scaffold_7, + strand, nucleotides 1,160,377 to 1,161,832
See nucleotide sequence around mRNA_7220 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15583 and 15584 are separated by 209 nucleotides15584 and 15585 are separated by 549 nucleotides15585 and 15586 are separated by 191 nucleotides15586 and 15587 are separated by 87 nucleotides15587 and 15588 are separated by 95 nucleotides15588 and 15589 are separated by 1208 nucleotides15589 and 15590 are separated by 349 nucleotides15590 and 15591 are separated by 273 nucleotides15591 and 15592 are separated by 136 nucleotides15592 and 15593 are separated by 736 nucleotides mRNA_7215: 15583 - K10253 K10253 DOPA 4,5-dioxygenase, at 1,149,235 to 1,150,219 15583 mRNA_7216: 15584 - K01535 PMA1, PMA2 H+-transporting ATPase, at 1,150,429 to 1,154,847 15584 mRNA_7217: 15585 - KOG3309 Ferredoxin, at 1,155,397 to 1,156,419 15585 mRNA_7218: 15586 - K20405 NPRL2 nitrogen permease regulator 2-like protein, at 1,156,611 to 1,158,564 15586 mRNA_7219: 15587 - K15053 CHMP7 charged multivesicular body protein 7, at 1,158,652 to 1,160,281 15587 mRNA_7220: 15588 - HMMPfam-zinc-RING finger domain-PF14634,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 1,160,377 to 1,161,832 15588 mRNA_7221: 15589 - K02133 ATPeF1B, ATP5B, ATP2 F-type H+-transporting ATPase subunit beta, at 1,163,041 to 1,165,362 15589 mRNA_7222: 15590 - KOG1572 Predicted protein tyrosine phosphatase, at 1,165,712 to 1,166,653 15590 mRNA_7223: 15591 - K19983 EXOC1, SEC3 exocyst complex component 1, at 1,166,927 to 1,171,458 15591 mRNA_7224: 15592 - K15564 CTK2 CTD kinase subunit beta, at 1,171,595 to 1,173,622 15592 mRNA_7225: 15593 - Hypothetical Protein, at 1,174,359 to 1,174,926 15593
Locus Name Description Strand Phenotype
mRNA_7215 15583 K10253 K10253 DOPA 4,5-dioxygenase + cofit
mRNA_7216 15584 K01535 PMA1, PMA2 H+-transporting ATPase - cofit
mRNA_7217 15585 KOG3309 Ferredoxin - no data
mRNA_7218 15586 K20405 NPRL2 nitrogen permease regulator 2-like protein + cofit
mRNA_7219 15587 K15053 CHMP7 charged multivesicular body protein 7 - cofit
mRNA_7220 15588 HMMPfam-zinc-RING finger domain-PF14634,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850 + cofit
mRNA_7221 15589 K02133 ATPeF1B, ATP5B, ATP2 F-type H+-transporting ATPase subunit beta + no data
mRNA_7222 15590 KOG1572 Predicted protein tyrosine phosphatase + insig.
mRNA_7223 15591 K19983 EXOC1, SEC3 exocyst complex component 1 - strong
mRNA_7224 15592 K15564 CTK2 CTD kinase subunit beta + no data
mRNA_7225 15593 Hypothetical Protein - cofit

Or browse nearby genes

Or see the comparative fitness browser