Gene info for mRNA_7402 in Rhodosporidium toruloides IFO0880

Name: 15770
Annotation: HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870
Type 1: Protein-coding gene
Located on scaffold scaffold_8, - strand, nucleotides 193,334 to 195,902
See nucleotide sequence around mRNA_7402 or for all of scaffold scaffold_8

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15765 and 15766 are separated by 483 nucleotides15766 and 15767 are separated by 283 nucleotides15767 and 15768 are separated by 163 nucleotides15768 and 15769 are separated by 478 nucleotides15769 and 15770 are separated by 132 nucleotides15770 and 15771 are separated by 721 nucleotides15771 and 15772 are separated by 208 nucleotides15772 and 15773 are separated by 211 nucleotides15773 and 15774 are separated by 745 nucleotides15774 and 15775 are separated by 581 nucleotides mRNA_7397: 15765 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 181,138 to 183,665 15765 mRNA_7398: 15766 - KOG0266 WD40 repeat-containing protein, at 184,149 to 185,888 15766 mRNA_7399: 15767 - K12859 TXNL4A, DIB1 U5 snRNP protein, DIM1 family, at 186,172 to 187,240 15767 mRNA_7400: 15768 - K08075 E3.1.3.32 polynucleotide 3'-phosphatase, at 187,404 to 189,530 15768 mRNA_7401: 15769 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 190,009 to 193,201 15769 mRNA_7402: 15770 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 193,334 to 195,902 15770 mRNA_7403: 15771 - Hypothetical Protein, at 196,624 to 197,387 15771 mRNA_7404: 15772 - HMMPfam-Protein of unknown function (DUF2470)-PF10615, at 197,596 to 198,665 15772 mRNA_7405: 15773 - KOG1589 Uncharacterized conserved protein, at 198,877 to 199,727 15773 mRNA_7406: 15774 - Hypothetical Protein, at 200,473 to 201,495 15774 mRNA_7407: 15775 - Hypothetical Protein, at 202,077 to 204,575 15775
Locus Name Description Strand Phenotype
mRNA_7397 15765 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_7398 15766 KOG0266 WD40 repeat-containing protein - cofit
mRNA_7399 15767 K12859 TXNL4A, DIB1 U5 snRNP protein, DIM1 family + no data
mRNA_7400 15768 K08075 E3.1.3.32 polynucleotide 3'-phosphatase - insig.
mRNA_7401 15769 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_7402 15770 HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870 - cofit
mRNA_7403 15771 Hypothetical Protein - no data
mRNA_7404 15772 HMMPfam-Protein of unknown function (DUF2470)-PF10615 - cofit
mRNA_7405 15773 KOG1589 Uncharacterized conserved protein - no data
mRNA_7406 15774 Hypothetical Protein + cofit
mRNA_7407 15775 Hypothetical Protein + cofit

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