Gene info for mRNA_7522 in Rhodosporidium toruloides IFO0880

Name: 15890
Annotation: HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459
Type 1: Protein-coding gene
Located on scaffold scaffold_8, + strand, nucleotides 490,428 to 491,714
See nucleotide sequence around mRNA_7522 or for all of scaffold scaffold_8

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15885 and 15886 are separated by 140 nucleotides15886 and 15887 are separated by 419 nucleotides15887 and 15888 are separated by 657 nucleotides15888 and 15889 are separated by 115 nucleotides15889 and 15890 are separated by 1223 nucleotides15890 and 15891 are separated by 366 nucleotides15891 and 15892 are separated by 246 nucleotides15892 and 15893 are separated by 109 nucleotides15893 and 15894 are separated by 110 nucleotides15894 and 15895 are separated by 244 nucleotides mRNA_7517: 15885 - Hypothetical Protein, at 476,971 to 478,237 15885 mRNA_7518: 15886 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 478,378 to 480,820 15886 mRNA_7519: 15887 - HMMPfam-Protoglobin-PF11563, at 481,240 to 482,191 15887 mRNA_7520: 15888 - K18725 POM152 nucleoporin POM152, at 482,849 to 487,263 15888 mRNA_7521: 15889 - K18624 MAEA, EMP macrophage erythroblast attacher, at 487,379 to 489,204 15889 mRNA_7522: 15890 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 490,428 to 491,714 15890 mRNA_7523: 15891 - KOG0143 Iron/ascorbate family oxidoreductases, at 492,081 to 493,296 15891 mRNA_7524: 15892 - BLAST putative heatshock protein [Serpula lacrymans var..., at 493,543 to 495,211 15892 mRNA_7525: 15893 - KOG3425 Uncharacterized conserved protein, at 495,321 to 495,867 15893 mRNA_7526: 15894 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 495,978 to 498,115 15894 mRNA_7527: 15895 - K20031 ZDHHC6 palmitoyltransferase ZDHHC6, at 498,360 to 499,661 15895
Locus Name Description Strand Phenotype
mRNA_7517 15885 Hypothetical Protein + cofit
mRNA_7518 15886 KOG2641 Predicted seven transmembrane receptor - rhodopsin family + cofit
mRNA_7519 15887 HMMPfam-Protoglobin-PF11563 - cofit
mRNA_7520 15888 K18725 POM152 nucleoporin POM152 - cofit
mRNA_7521 15889 K18624 MAEA, EMP macrophage erythroblast attacher + cofit
mRNA_7522 15890 HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459 + cofit
mRNA_7523 15891 KOG0143 Iron/ascorbate family oxidoreductases - cofit
mRNA_7524 15892 BLAST putative heatshock protein [Serpula lacrymans var... + cofit
mRNA_7525 15893 KOG3425 Uncharacterized conserved protein - cofit
mRNA_7526 15894 K13289 CTSA, CPY cathepsin A (carboxypeptidase C) + cofit
mRNA_7527 15895 K20031 ZDHHC6 palmitoyltransferase ZDHHC6 + cofit

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