Gene info for mRNA_7808 in Rhodosporidium toruloides IFO0880

Name: 16176
Annotation: K20183 VPS39, VAM6 Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Type 1: Protein-coding gene
Located on scaffold scaffold_8, + strand, nucleotides 1,117,423 to 1,121,551
See nucleotide sequence around mRNA_7808 or for all of scaffold scaffold_8

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16171 and 16172 are separated by 281 nucleotides16172 and 16173 are separated by 203 nucleotides16173 and 16174 are separated by 354 nucleotides16174 and 16175 are separated by 452 nucleotides16175 and 16176 are separated by 212 nucleotides16176 and 16177 are separated by 382 nucleotides16177 and 16178 are separated by 938 nucleotides16178 and 16179 are separated by 421 nucleotides16179 and 16180 are separated by 403 nucleotides16180 and 16181 are separated by 401 nucleotides mRNA_7803: 16171 - K11855 USP36_42 ubiquitin carboxyl-terminal hydrolase 36/42, at 1,108,801 to 1,111,238 16171 mRNA_7804: 16172 - KOG1204 Predicted dehydrogenase, at 1,111,520 to 1,112,833 16172 mRNA_7805: 16173 - K12389 BTS, CLN3 battenin, at 1,113,037 to 1,115,028 16173 mRNA_7806: 16174 - Hypothetical Protein, at 1,115,383 to 1,115,856 16174 mRNA_7807: 16175 - K01304 pcp pyroglutamyl-peptidase, at 1,116,309 to 1,117,210 16175 mRNA_7808: 16176 - K20183 VPS39, VAM6 Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39, at 1,117,423 to 1,121,551 16176 mRNA_7809: 16177 - Hypothetical Protein, at 1,121,934 to 1,122,810 16177 mRNA_7810: 16178 - K02358 tuf, TUFM elongation factor Tu, at 1,123,749 to 1,125,478 16178 mRNA_7811: 16179 - Hypothetical Protein, at 1,125,900 to 1,126,824 16179 mRNA_7812: 16180 - K12876 RBM8A, Y14 RNA-binding protein 8A, at 1,127,228 to 1,128,549 16180 mRNA_7813: 16181 - K01476 E3.5.3.1, rocF, arg arginase, at 1,128,951 to 1,130,543 16181
Locus Name Description Strand Phenotype
mRNA_7803 16171 K11855 USP36_42 ubiquitin carboxyl-terminal hydrolase 36/42 - cofit
mRNA_7804 16172 KOG1204 Predicted dehydrogenase + cofit
mRNA_7805 16173 K12389 BTS, CLN3 battenin + cofit
mRNA_7806 16174 Hypothetical Protein + cofit
mRNA_7807 16175 K01304 pcp pyroglutamyl-peptidase - cofit
mRNA_7808 16176 K20183 VPS39, VAM6 Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 + cofit
mRNA_7809 16177 Hypothetical Protein - insig.
mRNA_7810 16178 K02358 tuf, TUFM elongation factor Tu + no data
mRNA_7811 16179 Hypothetical Protein + cofit
mRNA_7812 16180 K12876 RBM8A, Y14 RNA-binding protein 8A + no data
mRNA_7813 16181 K01476 E3.5.3.1, rocF, arg arginase + no data

Or browse nearby genes

Or see the comparative fitness browser