Gene info for mRNA_8013 in Rhodosporidium toruloides IFO0880

Name: 16381
Annotation: SUPERFAMILY--SSF58113
Type 1: Protein-coding gene
Located on scaffold scaffold_9, + strand, nucleotides 212,070 to 213,325
See nucleotide sequence around mRNA_8013 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16376 and 16377 are separated by 469 nucleotides16377 and 16378 are separated by 577 nucleotides16378 and 16379 are separated by 384 nucleotides16379 and 16380 are separated by 304 nucleotides16380 and 16381 are separated by 460 nucleotides16381 and 16382 are separated by 312 nucleotides16382 and 16383 are separated by 301 nucleotides16383 and 16384 are separated by 195 nucleotides16384 and 16385 are separated by 369 nucleotides16385 and 16386 are separated by 911 nucleotides mRNA_8008: 16376 - BLAST CAMK/CAMKL protein kinase [Microbotryum lychnidis-dio..., at 202,632 to 203,729 16376 mRNA_8009: 16377 - K02515 HSL1 serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase, at 204,199 to 205,713 16377 mRNA_8010: 16378 - K15414 C1QBP complement component 1 Q subcomponent-binding protein, mitochondrial, at 206,291 to 207,434 16378 mRNA_8011: 16379 - K09537 DNAJC17 DnaJ homolog subfamily C member 17, at 207,819 to 208,967 16379 mRNA_8012: 16380 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 209,272 to 211,609 16380 mRNA_8013: 16381 - SUPERFAMILY--SSF58113, at 212,070 to 213,325 16381 mRNA_8014: 16382 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 213,638 to 214,851 16382 mRNA_8015: 16383 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 215,153 to 216,105 16383 mRNA_8016: 16384 - K11968 ARIH1 ariadne-1, at 216,301 to 218,518 16384 mRNA_8017: 16385 - K11087 SNRPD1, SMD1 small nuclear ribonucleoprotein D1, at 218,888 to 219,506 16385 mRNA_8018: 16386 - Hypothetical Protein, at 220,418 to 221,008 16386
Locus Name Description Strand Phenotype
mRNA_8008 16376 BLAST CAMK/CAMKL protein kinase [Microbotryum lychnidis-dio... - cofit
mRNA_8009 16377 K02515 HSL1 serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase - no data
mRNA_8010 16378 K15414 C1QBP complement component 1 Q subcomponent-binding protein, mitochondrial - cofit
mRNA_8011 16379 K09537 DNAJC17 DnaJ homolog subfamily C member 17 + cofit
mRNA_8012 16380 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 + cofit
mRNA_8013 16381 SUPERFAMILY--SSF58113 + strong
mRNA_8014 16382 HMMPfam-Protein of unknown function (DUF1769)-PF08588 + cofit
mRNA_8015 16383 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 + cofit
mRNA_8016 16384 K11968 ARIH1 ariadne-1 - no data
mRNA_8017 16385 K11087 SNRPD1, SMD1 small nuclear ribonucleoprotein D1 - no data
mRNA_8018 16386 Hypothetical Protein - cofit

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