Gene info for mRNA_8015 in Rhodosporidium toruloides IFO0880

Name: 16383
Annotation: HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
Type 1: Protein-coding gene
Located on scaffold scaffold_9, + strand, nucleotides 215,153 to 216,105
See nucleotide sequence around mRNA_8015 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16378 and 16379 are separated by 384 nucleotides16379 and 16380 are separated by 304 nucleotides16380 and 16381 are separated by 460 nucleotides16381 and 16382 are separated by 312 nucleotides16382 and 16383 are separated by 301 nucleotides16383 and 16384 are separated by 195 nucleotides16384 and 16385 are separated by 369 nucleotides16385 and 16386 are separated by 911 nucleotides16386 and 16387 are separated by 1896 nucleotides16387 and 16388 are separated by 183 nucleotides mRNA_8010: 16378 - K15414 C1QBP complement component 1 Q subcomponent-binding protein, mitochondrial, at 206,291 to 207,434 16378 mRNA_8011: 16379 - K09537 DNAJC17 DnaJ homolog subfamily C member 17, at 207,819 to 208,967 16379 mRNA_8012: 16380 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 209,272 to 211,609 16380 mRNA_8013: 16381 - SUPERFAMILY--SSF58113, at 212,070 to 213,325 16381 mRNA_8014: 16382 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 213,638 to 214,851 16382 mRNA_8015: 16383 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 215,153 to 216,105 16383 mRNA_8016: 16384 - K11968 ARIH1 ariadne-1, at 216,301 to 218,518 16384 mRNA_8017: 16385 - K11087 SNRPD1, SMD1 small nuclear ribonucleoprotein D1, at 218,888 to 219,506 16385 mRNA_8018: 16386 - Hypothetical Protein, at 220,418 to 221,008 16386 mRNA_8019: 16387 - Hypothetical Protein, at 222,905 to 224,449 16387 mRNA_8020: 16388 - K19841 STE50 protein STE50, at 224,633 to 227,369 16388
Locus Name Description Strand Phenotype
mRNA_8010 16378 K15414 C1QBP complement component 1 Q subcomponent-binding protein, mitochondrial - cofit
mRNA_8011 16379 K09537 DNAJC17 DnaJ homolog subfamily C member 17 + cofit
mRNA_8012 16380 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 + cofit
mRNA_8013 16381 SUPERFAMILY--SSF58113 + strong
mRNA_8014 16382 HMMPfam-Protein of unknown function (DUF1769)-PF08588 + cofit
mRNA_8015 16383 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 + cofit
mRNA_8016 16384 K11968 ARIH1 ariadne-1 - no data
mRNA_8017 16385 K11087 SNRPD1, SMD1 small nuclear ribonucleoprotein D1 - no data
mRNA_8018 16386 Hypothetical Protein - cofit
mRNA_8019 16387 Hypothetical Protein - cofit
mRNA_8020 16388 K19841 STE50 protein STE50 + cofit

Or browse nearby genes

Or see the comparative fitness browser