Gene info for mRNA_8023 in Rhodosporidium toruloides IFO0880

Name: 16391
Annotation: HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 230,764 to 233,185
See nucleotide sequence around mRNA_8023 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16386 and 16387 are separated by 1896 nucleotides16387 and 16388 are separated by 183 nucleotides16388 and 16389 are separated by 82 nucleotides16389 and 16390 are separated by 111 nucleotides16390 and 16391 are separated by 123 nucleotides16391 and 16392 are separated by 165 nucleotides16392 and 16393 are separated by 486 nucleotides16393 and 16394 are separated by 311 nucleotides16394 and 16395 are separated by 264 nucleotides16395 and 16396 are separated by 11 nucleotides mRNA_8018: 16386 - Hypothetical Protein, at 220,418 to 221,008 16386 mRNA_8019: 16387 - Hypothetical Protein, at 222,905 to 224,449 16387 mRNA_8020: 16388 - K19841 STE50 protein STE50, at 224,633 to 227,369 16388 mRNA_8021: 16389 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905, at 227,452 to 229,516 16389 mRNA_8022: 16390 - BLAST Ubiquinone biosynthesis protein coq9, mitochondrial [..., at 229,628 to 230,640 16390 mRNA_8023: 16391 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 230,764 to 233,185 16391 mRNA_8024: 16392 - K02988 RP-S5, MRPS5, rpsE small subunit ribosomal protein S5, at 233,351 to 234,544 16392 mRNA_8025: 16393 - KOG0118 FOG RRM domain, at 235,031 to 239,261 16393 mRNA_8026: 16394 - K03515 REV1 DNA repair protein REV1, at 239,573 to 243,561 16394 mRNA_8027: 16395 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 243,826 to 244,717 16395 mRNA_8028: 16396 - K06100 SYMPK symplekin, at 244,729 to 248,815 16396
Locus Name Description Strand Phenotype
mRNA_8018 16386 Hypothetical Protein - cofit
mRNA_8019 16387 Hypothetical Protein - cofit
mRNA_8020 16388 K19841 STE50 protein STE50 + cofit
mRNA_8021 16389 HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905 - insig.
mRNA_8022 16390 BLAST Ubiquinone biosynthesis protein coq9, mitochondrial [... + no data
mRNA_8023 16391 HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978 - cofit
mRNA_8024 16392 K02988 RP-S5, MRPS5, rpsE small subunit ribosomal protein S5 - no data
mRNA_8025 16393 KOG0118 FOG RRM domain + cofit
mRNA_8026 16394 K03515 REV1 DNA repair protein REV1 + insig.
mRNA_8027 16395 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 + insig.
mRNA_8028 16396 K06100 SYMPK symplekin - no data

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