Gene info for mRNA_8028 in Rhodosporidium toruloides IFO0880

Name: 16396
Annotation: K06100 SYMPK symplekin
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 244,729 to 248,815
See nucleotide sequence around mRNA_8028 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16391 and 16392 are separated by 165 nucleotides16392 and 16393 are separated by 486 nucleotides16393 and 16394 are separated by 311 nucleotides16394 and 16395 are separated by 264 nucleotides16395 and 16396 are separated by 11 nucleotides16396 and 16397 are separated by 105 nucleotides16397 and 16398 are separated by 491 nucleotides16398 and 16399 are separated by 283 nucleotides16399 and 16400 are separated by 592 nucleotides16400 and 16401 are separated by 265 nucleotides mRNA_8023: 16391 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 230,764 to 233,185 16391 mRNA_8024: 16392 - K02988 RP-S5, MRPS5, rpsE small subunit ribosomal protein S5, at 233,351 to 234,544 16392 mRNA_8025: 16393 - KOG0118 FOG RRM domain, at 235,031 to 239,261 16393 mRNA_8026: 16394 - K03515 REV1 DNA repair protein REV1, at 239,573 to 243,561 16394 mRNA_8027: 16395 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 243,826 to 244,717 16395 mRNA_8028: 16396 - K06100 SYMPK symplekin, at 244,729 to 248,815 16396 mRNA_8029: 16397 - K02152 ATPeV1G, ATP6G V-type H+-transporting ATPase subunit G, at 248,921 to 249,552 16397 mRNA_8030: 16398 - KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains, at 250,044 to 251,923 16398 mRNA_8031: 16399 - K14325 RNPS1 RNA-binding protein with serine-rich domain 1, at 252,207 to 252,830 16399 mRNA_8032: 16400 - K14007 SEC24 protein transport protein SEC24, at 253,423 to 257,120 16400 mRNA_8033: 16401 - K08488 STX7 syntaxin 7, at 257,386 to 258,889 16401
Locus Name Description Strand Phenotype
mRNA_8023 16391 HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978 - cofit
mRNA_8024 16392 K02988 RP-S5, MRPS5, rpsE small subunit ribosomal protein S5 - no data
mRNA_8025 16393 KOG0118 FOG RRM domain + cofit
mRNA_8026 16394 K03515 REV1 DNA repair protein REV1 + insig.
mRNA_8027 16395 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 + insig.
mRNA_8028 16396 K06100 SYMPK symplekin - no data
mRNA_8029 16397 K02152 ATPeV1G, ATP6G V-type H+-transporting ATPase subunit G + no data
mRNA_8030 16398 KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains - cofit
mRNA_8031 16399 K14325 RNPS1 RNA-binding protein with serine-rich domain 1 - insig.
mRNA_8032 16400 K14007 SEC24 protein transport protein SEC24 - no data
mRNA_8033 16401 K08488 STX7 syntaxin 7 + no data

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