Gene info for mRNA_8059 in Rhodosporidium toruloides IFO0880

Name: 16427
Annotation: HMMPfam-Translation initiation factor IF-3, C-terminal domain-PF00707,HMMPfam-Translation initiation factor IF-3, N-terminal domain-PF05198,SUPERFAMILY--SSF54364,SUPERFAMILY--SSF55200
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 324,105 to 324,902
See nucleotide sequence around mRNA_8059 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16422 and 16423 are separated by 127 nucleotides16423 and 16424 are separated by 276 nucleotides16424 and 16425 are separated by 979 nucleotides16425 and 16426 are separated by 22 nucleotides16426 and 16427 are separated by 580 nucleotides16427 and 16428 are separated by 715 nucleotides16428 and 16429 are separated by 868 nucleotides16429 and 16430 are separated by 152 nucleotides16430 and 16431 are separated by 507 nucleotides16431 and 16432 are separated by 296 nucleotides mRNA_8054: 16422 - K03036 PSMD11, RPN6 26S proteasome regulatory subunit N6, at 310,865 to 312,762 16422 mRNA_8055: 16423 - K06173 truA, PUS1 tRNA pseudouridine38-40 synthase, at 312,890 to 314,981 16423 mRNA_8056: 16424 - Hypothetical Protein, at 315,258 to 318,661 16424 mRNA_8057: 16425 - K08866 TTK, MPS1 serine/threonine-protein kinase TTK/MPS1, at 319,641 to 320,716 16425 mRNA_8058: 16426 - Hypothetical Protein, at 320,739 to 323,524 16426 mRNA_8059: 16427 - HMMPfam-Translation initiation factor IF-3, C-terminal domain-PF00707,HMMPfam-Translation initiation factor IF-3, N-terminal domain-PF05198,SUPERFAMILY--SSF54364,SUPERFAMILY--SSF55200, at 324,105 to 324,902 16427 mRNA_8060: 16428 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 325,618 to 328,246 16428 mRNA_8061: 16429 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 329,115 to 329,494 16429 mRNA_8062: 16430 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 329,647 to 331,079 16430 mRNA_8063: 16431 - HMMPfam-Protein of unknown function (DUF3500)-PF12006, at 331,587 to 333,110 16431 mRNA_8064: 16432 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 333,407 to 335,918 16432
Locus Name Description Strand Phenotype
mRNA_8054 16422 K03036 PSMD11, RPN6 26S proteasome regulatory subunit N6 + no data
mRNA_8055 16423 K06173 truA, PUS1 tRNA pseudouridine38-40 synthase - no data
mRNA_8056 16424 Hypothetical Protein - no data
mRNA_8057 16425 K08866 TTK, MPS1 serine/threonine-protein kinase TTK/MPS1 - no data
mRNA_8058 16426 Hypothetical Protein - no data
mRNA_8059 16427 HMMPfam-Translation initiation factor IF-3, C-terminal domain-PF00707,HMMPfam-Translation initiation factor IF-3, N-terminal domain-PF05198,SUPERFAMILY--SSF54364,SUPERFAMILY--SSF55200 - no data
mRNA_8060 16428 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + sig.
mRNA_8061 16429 BLAST protein of unknown function [Taphrina deformans PYCC ... + no data
mRNA_8062 16430 KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter - cofit
mRNA_8063 16431 HMMPfam-Protein of unknown function (DUF3500)-PF12006 - cofit
mRNA_8064 16432 HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + cofit

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