Gene info for mRNA_8064 in Rhodosporidium toruloides IFO0880

Name: 16432
Annotation: HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_9, + strand, nucleotides 333,407 to 335,918
See nucleotide sequence around mRNA_8064 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16427 and 16428 are separated by 715 nucleotides16428 and 16429 are separated by 868 nucleotides16429 and 16430 are separated by 152 nucleotides16430 and 16431 are separated by 507 nucleotides16431 and 16432 are separated by 296 nucleotides16432 and 16433 are separated by 94 nucleotides16433 and 16434 are separated by 685 nucleotides16434 and 16435 are separated by 711 nucleotides16435 and 16436 are separated by 257 nucleotides16436 and 16437 are separated by 238 nucleotides mRNA_8059: 16427 - HMMPfam-Translation initiation factor IF-3, C-terminal domain-PF00707,HMMPfam-Translation initiation factor IF-3, N-terminal domain-PF05198,SUPERFAMILY--SSF54364,SUPERFAMILY--SSF55200, at 324,105 to 324,902 16427 mRNA_8060: 16428 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 325,618 to 328,246 16428 mRNA_8061: 16429 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 329,115 to 329,494 16429 mRNA_8062: 16430 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 329,647 to 331,079 16430 mRNA_8063: 16431 - HMMPfam-Protein of unknown function (DUF3500)-PF12006, at 331,587 to 333,110 16431 mRNA_8064: 16432 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 333,407 to 335,918 16432 mRNA_8065: 16433 - KOG0732 AAA+-type ATPase containing the bromodomain, at 336,013 to 341,106 16433 mRNA_8066: 16434 - K20181 VPS18, PEP3 vacuolar protein sorting-associated protein 18, at 341,792 to 345,856 16434 mRNA_8067: 16435 - K12399 AP3S AP-3 complex subunit sigma, at 346,568 to 347,476 16435 mRNA_8068: 16436 - KOG1198 Zinc-binding oxidoreductase, at 347,734 to 349,027 16436 mRNA_8069: 16437 - K11240 MSG5 tyrosine-protein phosphatase MSG5, at 349,266 to 352,237 16437
Locus Name Description Strand Phenotype
mRNA_8059 16427 HMMPfam-Translation initiation factor IF-3, C-terminal domain-PF00707,HMMPfam-Translation initiation factor IF-3, N-terminal domain-PF05198,SUPERFAMILY--SSF54364,SUPERFAMILY--SSF55200 - no data
mRNA_8060 16428 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + sig.
mRNA_8061 16429 BLAST protein of unknown function [Taphrina deformans PYCC ... + no data
mRNA_8062 16430 KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter - cofit
mRNA_8063 16431 HMMPfam-Protein of unknown function (DUF3500)-PF12006 - cofit
mRNA_8064 16432 HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + cofit
mRNA_8065 16433 KOG0732 AAA+-type ATPase containing the bromodomain - no data
mRNA_8066 16434 K20181 VPS18, PEP3 vacuolar protein sorting-associated protein 18 + no data
mRNA_8067 16435 K12399 AP3S AP-3 complex subunit sigma - cofit
mRNA_8068 16436 KOG1198 Zinc-binding oxidoreductase + cofit
mRNA_8069 16437 K11240 MSG5 tyrosine-protein phosphatase MSG5 - cofit

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