Gene info for mRNA_8067 in Rhodosporidium toruloides IFO0880

Name: 16435
Annotation: K12399 AP3S AP-3 complex subunit sigma
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 346,568 to 347,476
See nucleotide sequence around mRNA_8067 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16430 and 16431 are separated by 507 nucleotides16431 and 16432 are separated by 296 nucleotides16432 and 16433 are separated by 94 nucleotides16433 and 16434 are separated by 685 nucleotides16434 and 16435 are separated by 711 nucleotides16435 and 16436 are separated by 257 nucleotides16436 and 16437 are separated by 238 nucleotides16437 and 16438 are separated by 733 nucleotides16438 and 16439 are separated by 782 nucleotides16439 and 16440 are separated by 365 nucleotides mRNA_8062: 16430 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 329,647 to 331,079 16430 mRNA_8063: 16431 - HMMPfam-Protein of unknown function (DUF3500)-PF12006, at 331,587 to 333,110 16431 mRNA_8064: 16432 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 333,407 to 335,918 16432 mRNA_8065: 16433 - KOG0732 AAA+-type ATPase containing the bromodomain, at 336,013 to 341,106 16433 mRNA_8066: 16434 - K20181 VPS18, PEP3 vacuolar protein sorting-associated protein 18, at 341,792 to 345,856 16434 mRNA_8067: 16435 - K12399 AP3S AP-3 complex subunit sigma, at 346,568 to 347,476 16435 mRNA_8068: 16436 - KOG1198 Zinc-binding oxidoreductase, at 347,734 to 349,027 16436 mRNA_8069: 16437 - K11240 MSG5 tyrosine-protein phosphatase MSG5, at 349,266 to 352,237 16437 mRNA_8070: 16438 - KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain, at 352,971 to 356,378 16438 mRNA_8071: 16439 - Hypothetical Protein, at 357,161 to 359,241 16439 mRNA_8072: 16440 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 359,607 to 361,273 16440
Locus Name Description Strand Phenotype
mRNA_8062 16430 KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter - cofit
mRNA_8063 16431 HMMPfam-Protein of unknown function (DUF3500)-PF12006 - cofit
mRNA_8064 16432 HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + cofit
mRNA_8065 16433 KOG0732 AAA+-type ATPase containing the bromodomain - no data
mRNA_8066 16434 K20181 VPS18, PEP3 vacuolar protein sorting-associated protein 18 + no data
mRNA_8067 16435 K12399 AP3S AP-3 complex subunit sigma - cofit
mRNA_8068 16436 KOG1198 Zinc-binding oxidoreductase + cofit
mRNA_8069 16437 K11240 MSG5 tyrosine-protein phosphatase MSG5 - cofit
mRNA_8070 16438 KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain - cofit
mRNA_8071 16439 Hypothetical Protein - cofit
mRNA_8072 16440 K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41 - cofit

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