Gene info for mRNA_8075 in Rhodosporidium toruloides IFO0880

Name: 16443
Annotation: K13525 VCP, CDC48 transitional endoplasmic reticulum ATPase
Type 1: Protein-coding gene
Located on scaffold scaffold_9, + strand, nucleotides 364,328 to 367,178
See nucleotide sequence around mRNA_8075 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16438 and 16439 are separated by 782 nucleotides16439 and 16440 are separated by 365 nucleotides16440 and 16441 are separated by 405 nucleotides16441 and 16442 are separated by 409 nucleotides16442 and 16443 are separated by 409 nucleotides16443 and 16444 are separated by 1203 nucleotides16444 and 16445 are separated by 359 nucleotides16445 and 16446 are separated by 194 nucleotides16446 and 16447 are separated by 260 nucleotides16447 and 16448 are separated by 168 nucleotides mRNA_8070: 16438 - KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain, at 352,971 to 356,378 16438 mRNA_8071: 16439 - Hypothetical Protein, at 357,161 to 359,241 16439 mRNA_8072: 16440 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 359,607 to 361,273 16440 mRNA_8073: 16441 - Hypothetical Protein, at 361,679 to 362,906 16441 mRNA_8074: 16442 - Hypothetical Protein, at 363,316 to 363,918 16442 mRNA_8075: 16443 - K13525 VCP, CDC48 transitional endoplasmic reticulum ATPase, at 364,328 to 367,178 16443 mRNA_8076: 16444 - Hypothetical Protein, at 368,382 to 369,179 16444 mRNA_8077: 16445 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 369,539 to 370,935 16445 mRNA_8078: 16446 - HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786, at 371,130 to 372,195 16446 mRNA_8079: 16447 - BLAST PRMT5-domain-containing protein [Sanghuangporus baumii], at 372,456 to 373,383 16447 mRNA_8080: 16448 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 373,552 to 376,166 16448
Locus Name Description Strand Phenotype
mRNA_8070 16438 KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain - cofit
mRNA_8071 16439 Hypothetical Protein - cofit
mRNA_8072 16440 K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41 - cofit
mRNA_8073 16441 Hypothetical Protein + cofit
mRNA_8074 16442 Hypothetical Protein - cofit
mRNA_8075 16443 K13525 VCP, CDC48 transitional endoplasmic reticulum ATPase + no data
mRNA_8076 16444 Hypothetical Protein + cofit
mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + strong
mRNA_8078 16446 HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786 + cofit
mRNA_8079 16447 BLAST PRMT5-domain-containing protein [Sanghuangporus baumii] - cofit
mRNA_8080 16448 HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474 + insig.

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