Gene info for mRNA_8078 in Rhodosporidium toruloides IFO0880

Name: 16446
Annotation: HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786
Type 1: Protein-coding gene
Located on scaffold scaffold_9, + strand, nucleotides 371,130 to 372,195
See nucleotide sequence around mRNA_8078 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16441 and 16442 are separated by 409 nucleotides16442 and 16443 are separated by 409 nucleotides16443 and 16444 are separated by 1203 nucleotides16444 and 16445 are separated by 359 nucleotides16445 and 16446 are separated by 194 nucleotides16446 and 16447 are separated by 260 nucleotides16447 and 16448 are separated by 168 nucleotides16448 and 16449 are separated by 175 nucleotides16449 and 16450 are separated by 477 nucleotides16450 and 16451 are separated by 197 nucleotides mRNA_8073: 16441 - Hypothetical Protein, at 361,679 to 362,906 16441 mRNA_8074: 16442 - Hypothetical Protein, at 363,316 to 363,918 16442 mRNA_8075: 16443 - K13525 VCP, CDC48 transitional endoplasmic reticulum ATPase, at 364,328 to 367,178 16443 mRNA_8076: 16444 - Hypothetical Protein, at 368,382 to 369,179 16444 mRNA_8077: 16445 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 369,539 to 370,935 16445 mRNA_8078: 16446 - HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786, at 371,130 to 372,195 16446 mRNA_8079: 16447 - BLAST PRMT5-domain-containing protein [Sanghuangporus baumii], at 372,456 to 373,383 16447 mRNA_8080: 16448 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 373,552 to 376,166 16448 mRNA_8081: 16449 - K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase, at 376,342 to 377,975 16449 mRNA_8082: 16450 - BLAST zinc-binding oxidoreductase [Moesziomyces antarcticus..., at 378,453 to 379,519 16450 mRNA_8083: 16451 - K17774 MDM10 mitochondrial distribution and morphology protein 10, at 379,717 to 381,351 16451
Locus Name Description Strand Phenotype
mRNA_8073 16441 Hypothetical Protein + cofit
mRNA_8074 16442 Hypothetical Protein - cofit
mRNA_8075 16443 K13525 VCP, CDC48 transitional endoplasmic reticulum ATPase + no data
mRNA_8076 16444 Hypothetical Protein + cofit
mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + strong
mRNA_8078 16446 HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786 + cofit
mRNA_8079 16447 BLAST PRMT5-domain-containing protein [Sanghuangporus baumii] - cofit
mRNA_8080 16448 HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474 + insig.
mRNA_8081 16449 K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase - cofit
mRNA_8082 16450 BLAST zinc-binding oxidoreductase [Moesziomyces antarcticus... + no data
mRNA_8083 16451 K17774 MDM10 mitochondrial distribution and morphology protein 10 + no data

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