Gene info for mRNA_8144 in Rhodosporidium toruloides IFO0880

Name: 16512
Annotation: HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383
Type 1: Protein-coding gene
Located on scaffold scaffold_9, + strand, nucleotides 515,756 to 518,130
See nucleotide sequence around mRNA_8144 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16507 and 16508 are separated by 174 nucleotides16508 and 16509 are separated by 523 nucleotides16509 and 16510 are separated by 526 nucleotides16510 and 16511 are separated by 360 nucleotides16511 and 16512 are separated by 146 nucleotides16512 and 16513 are separated by 134 nucleotides16513 and 16514 are separated by 208 nucleotides16514 and 16515 are separated by 281 nucleotides16515 and 16516 are separated by 321 nucleotides16516 and 16517 are separated by 547 nucleotides mRNA_8139: 16507 - K01139 spoT, HDDC3 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, at 509,423 to 510,293 16507 mRNA_8140: 16508 - Hypothetical Protein, at 510,468 to 511,367 16508 mRNA_8141: 16509 - Hypothetical Protein, at 511,891 to 512,782 16509 mRNA_8142: 16510 - K06910 K06910 uncharacterized protein, at 513,309 to 514,169 16510 mRNA_8143: 16511 - K01515 nudF ADP-ribose pyrophosphatase, at 514,530 to 515,609 16511 mRNA_8144: 16512 - HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 515,756 to 518,130 16512 mRNA_8145: 16513 - K15304 RANBP3 Ran-binding protein 3, at 518,265 to 522,947 16513 mRNA_8146: 16514 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729,SUPERFAMILY--SSF55753, at 523,156 to 525,295 16514 mRNA_8147: 16515 - HMMPfam-Enoyl-CoA hydratase/isomerase family-PF00378,SUPERFAMILY--SSF52096, at 525,577 to 526,736 16515 mRNA_8148: 16516 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 527,058 to 528,382 16516 mRNA_8149: 16517 - KOG1198 Zinc-binding oxidoreductase, at 528,930 to 530,418 16517
Locus Name Description Strand Phenotype
mRNA_8139 16507 K01139 spoT, HDDC3 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase + cofit
mRNA_8140 16508 Hypothetical Protein - cofit
mRNA_8141 16509 Hypothetical Protein - cofit
mRNA_8142 16510 K06910 K06910 uncharacterized protein - cofit
mRNA_8143 16511 K01515 nudF ADP-ribose pyrophosphatase - cofit
mRNA_8144 16512 HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383 + cofit
mRNA_8145 16513 K15304 RANBP3 Ran-binding protein 3 - cofit
mRNA_8146 16514 HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729,SUPERFAMILY--SSF55753 - cofit
mRNA_8147 16515 HMMPfam-Enoyl-CoA hydratase/isomerase family-PF00378,SUPERFAMILY--SSF52096 - insig.
mRNA_8148 16516 HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961 - cofit
mRNA_8149 16517 KOG1198 Zinc-binding oxidoreductase + cofit

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