Gene info for mRNA_8158 in Rhodosporidium toruloides IFO0880

Name: 16526
Annotation: K14004 SEC13 protein transport protein SEC13
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 552,046 to 553,498
See nucleotide sequence around mRNA_8158 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16521 and 16522 are separated by 133 nucleotides16522 and 16523 are separated by 214 nucleotides16523 and 16524 are separated by 600 nucleotides16524 and 16525 are separated by 887 nucleotides16525 and 16526 are separated by 192 nucleotides16526 and 16527 are separated by 185 nucleotides16527 and 16528 are separated by 134 nucleotides16528 and 16529 are separated by 179 nucleotides16529 and 16530 are separated by 166 nucleotides16530 and 16531 are separated by 131 nucleotides mRNA_8153: 16521 - HMMPfam-Chalcone-flavanone isomerase-PF02431,SUPERFAMILY--SSF54626, at 537,692 to 539,063 16521 mRNA_8154: 16522 - HMMPfam-Ketopantoate reductase PanE/ApbA-PF02558,HMMPfam-Ketopantoate reductase PanE/ApbA C terminal-PF08546,SUPERFAMILY--SSF48179, at 539,197 to 540,895 16522 mRNA_8155: 16523 - K15361 WDR48, UAF1 WD repeat-containing protein 48, at 541,110 to 545,271 16523 mRNA_8156: 16524 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 545,872 to 548,769 16524 mRNA_8157: 16525 - ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 549,657 to 551,853 16525 mRNA_8158: 16526 - K14004 SEC13 protein transport protein SEC13, at 552,046 to 553,498 16526 mRNA_8159: 16527 - K17607 TIPRL, TIP41 type 2A phosphatase activator TIP41, at 553,684 to 555,009 16527 mRNA_8160: 16528 - K01873 VARS, valS valyl-tRNA synthetase, at 555,144 to 559,347 16528 mRNA_8161: 16529 - BLAST Actin cytoskeleton-regulatory complex protein pan1 [R..., at 559,527 to 560,747 16529 mRNA_8162: 16530 - K01288 KEX1 carboxypeptidase D, at 560,914 to 563,494 16530 mRNA_8163: 16531 - HMMPfam-Domain of unknown function (DUF4505)-PF14956, at 563,626 to 564,400 16531
Locus Name Description Strand Phenotype
mRNA_8153 16521 HMMPfam-Chalcone-flavanone isomerase-PF02431,SUPERFAMILY--SSF54626 - cofit
mRNA_8154 16522 HMMPfam-Ketopantoate reductase PanE/ApbA-PF02558,HMMPfam-Ketopantoate reductase PanE/ApbA C terminal-PF08546,SUPERFAMILY--SSF48179 + cofit
mRNA_8155 16523 K15361 WDR48, UAF1 WD repeat-containing protein 48 - cofit
mRNA_8156 16524 BLAST expressed protein [Cryptococcus neoformans var. neofo... - strong
mRNA_8157 16525 ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344 - cofit
mRNA_8158 16526 K14004 SEC13 protein transport protein SEC13 - no data
mRNA_8159 16527 K17607 TIPRL, TIP41 type 2A phosphatase activator TIP41 + cofit
mRNA_8160 16528 K01873 VARS, valS valyl-tRNA synthetase - no data
mRNA_8161 16529 BLAST Actin cytoskeleton-regulatory complex protein pan1 [R... + cofit
mRNA_8162 16530 K01288 KEX1 carboxypeptidase D - cofit
mRNA_8163 16531 HMMPfam-Domain of unknown function (DUF4505)-PF14956 - cofit

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