Gene info for mRNA_8232 in Rhodosporidium toruloides IFO0880

Name: 16600
Annotation: K12623 LSM4 U6 snRNA-associated Sm-like protein LSm4
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 727,305 to 728,231
See nucleotide sequence around mRNA_8232 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16595 and 16596 are separated by 2 nucleotides16596 and 16597 are separated by 567 nucleotides16597 and 16598 are separated by 916 nucleotides16598 and 16599 are separated by 505 nucleotides16599 and 16600 are separated by 162 nucleotides16600 and 16601 are separated by 205 nucleotides16601 and 16602 are separated by 225 nucleotides16602 and 16603 are separated by 417 nucleotides16603 and 16604 are separated by 169 nucleotides16604 and 16605 are separated by 393 nucleotides mRNA_8227: 16595 - BLAST Post-SET domain protein [Cordyceps confragosa RCEF 1005], at 715,339 to 716,197 16595 mRNA_8228: 16596 - K11648 SMARCB1, SNF5, INI1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, at 716,200 to 719,512 16596 mRNA_8229: 16597 - K04630 GNAI guanine nucleotide-binding protein G(i) subunit alpha, at 720,080 to 721,710 16597 mRNA_8230: 16598 - K09668 LARGE glycosyltransferase-like protein LARGE, at 722,627 to 724,673 16598 mRNA_8231: 16599 - KOG0927 Predicted transporter (ABC superfamily), at 725,179 to 727,142 16599 mRNA_8232: 16600 - K12623 LSM4 U6 snRNA-associated Sm-like protein LSm4, at 727,305 to 728,231 16600 mRNA_8233: 16601 - K13113 UBL5, HUB1 ubiquitin-like protein 5, at 728,437 to 729,216 16601 mRNA_8234: 16602 - KOG3702 Nuclear polyadenylated RNA binding protein, at 729,442 to 731,463 16602 mRNA_8235: 16603 - Hypothetical Protein, at 731,881 to 732,842 16603 mRNA_8236: 16604 - Interpro Fungal protein of unknown function (DUF1770) 0, at 733,012 to 733,833 16604 mRNA_8237: 16605 - K04345 PKA protein kinase A, at 734,227 to 736,264 16605
Locus Name Description Strand Phenotype
mRNA_8227 16595 BLAST Post-SET domain protein [Cordyceps confragosa RCEF 1005] - cofit
mRNA_8228 16596 K11648 SMARCB1, SNF5, INI1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 - cofit
mRNA_8229 16597 K04630 GNAI guanine nucleotide-binding protein G(i) subunit alpha - insig.
mRNA_8230 16598 K09668 LARGE glycosyltransferase-like protein LARGE - strong
mRNA_8231 16599 KOG0927 Predicted transporter (ABC superfamily) + cofit
mRNA_8232 16600 K12623 LSM4 U6 snRNA-associated Sm-like protein LSm4 - cofit
mRNA_8233 16601 K13113 UBL5, HUB1 ubiquitin-like protein 5 - no data
mRNA_8234 16602 KOG3702 Nuclear polyadenylated RNA binding protein + no data
mRNA_8235 16603 Hypothetical Protein - cofit
mRNA_8236 16604 Interpro Fungal protein of unknown function (DUF1770) 0 + cofit
mRNA_8237 16605 K04345 PKA protein kinase A - cofit

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