Gene info for mRNA_8285 in Rhodosporidium toruloides IFO0880

Name: 16653
Annotation: HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729
Type 1: Protein-coding gene
Located on scaffold scaffold_9, + strand, nucleotides 841,143 to 845,451
See nucleotide sequence around mRNA_8285 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16648 and 16649 are separated by 567 nucleotides16649 and 16650 are separated by 126 nucleotides16650 and 16651 are separated by 1215 nucleotides16651 and 16652 are separated by 408 nucleotides16652 and 16653 are separated by 493 nucleotides16653 and 16654 are separated by 469 nucleotides16654 and 16655 are separated by 862 nucleotides16655 and 16656 are separated by 569 nucleotides16656 and 16657 are separated by 1761 nucleotides16657 and 16658 are separated by 278 nucleotides mRNA_8280: 16648 - KOG2157 Predicted tubulin-tyrosine ligase, at 830,220 to 831,668 16648 mRNA_8281: 16649 - Hypothetical Protein, at 832,236 to 832,909 16649 mRNA_8282: 16650 - K11359 SPT7 transcriptional activator SPT7, at 833,036 to 836,352 16650 mRNA_8283: 16651 - HMMPfam-Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region-PF00645,PRINTS-Histone H5 signature-PR00624,ProSiteProfiles-Poly(ADP-ribose) polymerase zinc finger domain profile.-PS50064,SUPERFAMILY--SSF57716, at 837,568 to 839,019 16651 mRNA_8284: 16652 - K07023 K07023 putative hydrolases of HD superfamily, at 839,428 to 840,649 16652 mRNA_8285: 16653 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 841,143 to 845,451 16653 mRNA_8286: 16654 - HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716, at 845,921 to 849,990 16654 mRNA_8287: 16655 - K10245 ELO2 fatty acid elongase 2, at 850,853 to 852,932 16655 mRNA_8288: 16656 - KOG4135 Predicted phosphoglucosamine acetyltransferase, at 853,502 to 854,309 16656 mRNA_8289: 16657 - KOG1601 GATA-4/5/6 transcription factors, at 856,071 to 857,914 16657 mRNA_8290: 16658 - K02327 POLD1 DNA polymerase delta subunit 1, at 858,193 to 863,054 16658
Locus Name Description Strand Phenotype
mRNA_8280 16648 KOG2157 Predicted tubulin-tyrosine ligase + no data
mRNA_8281 16649 Hypothetical Protein + cofit
mRNA_8282 16650 K11359 SPT7 transcriptional activator SPT7 - cofit
mRNA_8283 16651 HMMPfam-Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region-PF00645,PRINTS-Histone H5 signature-PR00624,ProSiteProfiles-Poly(ADP-ribose) polymerase zinc finger domain profile.-PS50064,SUPERFAMILY--SSF57716 + insig.
mRNA_8284 16652 K07023 K07023 putative hydrolases of HD superfamily + cofit
mRNA_8285 16653 HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729 + no data
mRNA_8286 16654 HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716 - cofit
mRNA_8287 16655 K10245 ELO2 fatty acid elongase 2 + cofit
mRNA_8288 16656 KOG4135 Predicted phosphoglucosamine acetyltransferase - cofit
mRNA_8289 16657 KOG1601 GATA-4/5/6 transcription factors + cofit
mRNA_8290 16658 K02327 POLD1 DNA polymerase delta subunit 1 - no data

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