Gene info for mRNA_8290 in Rhodosporidium toruloides IFO0880

Name: 16658
Annotation: K02327 POLD1 DNA polymerase delta subunit 1
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 858,193 to 863,054
See nucleotide sequence around mRNA_8290 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16653 and 16654 are separated by 469 nucleotides16654 and 16655 are separated by 862 nucleotides16655 and 16656 are separated by 569 nucleotides16656 and 16657 are separated by 1761 nucleotides16657 and 16658 are separated by 278 nucleotides16658 and 16659 are separated by 214 nucleotides16659 and 16660 are separated by 475 nucleotides16660 and 16661 are separated by 275 nucleotides16661 and 16662 are separated by 924 nucleotides16662 and 16663 are separated by 444 nucleotides mRNA_8285: 16653 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 841,143 to 845,451 16653 mRNA_8286: 16654 - HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716, at 845,921 to 849,990 16654 mRNA_8287: 16655 - K10245 ELO2 fatty acid elongase 2, at 850,853 to 852,932 16655 mRNA_8288: 16656 - KOG4135 Predicted phosphoglucosamine acetyltransferase, at 853,502 to 854,309 16656 mRNA_8289: 16657 - KOG1601 GATA-4/5/6 transcription factors, at 856,071 to 857,914 16657 mRNA_8290: 16658 - K02327 POLD1 DNA polymerase delta subunit 1, at 858,193 to 863,054 16658 mRNA_8291: 16659 - K00851 E2.7.1.12, gntK, idnK gluconokinase, at 863,269 to 864,250 16659 mRNA_8292: 16660 - HMMPfam-OHCU decarboxylase-PF09349,SUPERFAMILY--SSF158694, at 864,726 to 865,561 16660 mRNA_8293: 16661 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339, at 865,837 to 868,084 16661 mRNA_8294: 16662 - Hypothetical Protein, at 869,009 to 869,206 16662 mRNA_8295: 16663 - Hypothetical Protein, at 869,651 to 870,841 16663
Locus Name Description Strand Phenotype
mRNA_8285 16653 HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729 + no data
mRNA_8286 16654 HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716 - cofit
mRNA_8287 16655 K10245 ELO2 fatty acid elongase 2 + cofit
mRNA_8288 16656 KOG4135 Predicted phosphoglucosamine acetyltransferase - cofit
mRNA_8289 16657 KOG1601 GATA-4/5/6 transcription factors + cofit
mRNA_8290 16658 K02327 POLD1 DNA polymerase delta subunit 1 - no data
mRNA_8291 16659 K00851 E2.7.1.12, gntK, idnK gluconokinase - cofit
mRNA_8292 16660 HMMPfam-OHCU decarboxylase-PF09349,SUPERFAMILY--SSF158694 + cofit
mRNA_8293 16661 HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339 - cofit
mRNA_8294 16662 Hypothetical Protein + cofit
mRNA_8295 16663 Hypothetical Protein + cofit

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