Gene info for mRNA_8393 in Rhodosporidium toruloides IFO0880

Name: 16761
Annotation: K12385 NPC1 Niemann-Pick C1 protein
Type 1: Protein-coding gene
Located on scaffold scaffold_9, - strand, nucleotides 1,108,603 to 1,114,039
See nucleotide sequence around mRNA_8393 or for all of scaffold scaffold_9

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 16756 and 16757 are separated by 1166 nucleotides16757 and 16758 are separated by 151 nucleotides16758 and 16759 are separated by 124 nucleotides16759 and 16760 are separated by 262 nucleotides16760 and 16761 are separated by 66 nucleotides16761 and 16762 are separated by 513 nucleotides16762 and 16763 are separated by 105 nucleotides16763 and 16764 are separated by 729 nucleotides16764 and 16765 are separated by 350 nucleotides16765 and 16766 are separated by 213 nucleotides mRNA_8388: 16756 - Hypothetical Protein, at 1,094,791 to 1,097,376 16756 mRNA_8389: 16757 - Hypothetical Protein, at 1,098,543 to 1,099,640 16757 mRNA_8390: 16758 - K00387 SUOX sulfite oxidase, at 1,099,792 to 1,101,469 16758 mRNA_8391: 16759 - HMMPfam-Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A-PF12222, at 1,101,594 to 1,103,958 16759 mRNA_8392: 16760 - ProSiteProfiles-JmjC domain profile.-PS51184,SMART-A domain family that is part of the cupin metalloenzyme superfamily.-SM00558,SUPERFAMILY--SSF51197, at 1,104,221 to 1,108,536 16760 mRNA_8393: 16761 - K12385 NPC1 Niemann-Pick C1 protein, at 1,108,603 to 1,114,039 16761 mRNA_8394: 16762 - KOG3680 Uncharacterized conserved protein, at 1,114,553 to 1,119,513 16762 mRNA_8395: 16763 - SUPERFAMILY--SSF52047, at 1,119,619 to 1,120,614 16763 mRNA_8396: 16764 - HMMPfam-Ribosomal protein S8-PF00410,SUPERFAMILY--SSF56047, at 1,121,344 to 1,121,811 16764 mRNA_8397: 16765 - K02946 RP-S10, MRPS10, rpsJ small subunit ribosomal protein S10, at 1,122,162 to 1,123,126 16765 mRNA_8398: 16766 - HMMPfam-Histone deacetylation protein Rxt3-PF08642, at 1,123,340 to 1,126,588 16766
Locus Name Description Strand Phenotype
mRNA_8388 16756 Hypothetical Protein - cofit
mRNA_8389 16757 Hypothetical Protein + cofit
mRNA_8390 16758 K00387 SUOX sulfite oxidase - cofit
mRNA_8391 16759 HMMPfam-Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A-PF12222 + insig.
mRNA_8392 16760 ProSiteProfiles-JmjC domain profile.-PS51184,SMART-A domain family that is part of the cupin metalloenzyme superfamily.-SM00558,SUPERFAMILY--SSF51197 + cofit
mRNA_8393 16761 K12385 NPC1 Niemann-Pick C1 protein - cofit
mRNA_8394 16762 KOG3680 Uncharacterized conserved protein + cofit
mRNA_8395 16763 SUPERFAMILY--SSF52047 - cofit
mRNA_8396 16764 HMMPfam-Ribosomal protein S8-PF00410,SUPERFAMILY--SSF56047 - no data
mRNA_8397 16765 K02946 RP-S10, MRPS10, rpsJ small subunit ribosomal protein S10 + no data
mRNA_8398 16766 HMMPfam-Histone deacetylation protein Rxt3-PF08642 + cofit

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