Gene info for mRNA_37 in Rhodosporidium toruloides IFO0880

Name: 8405
Annotation: HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 90,908 to 93,083
See nucleotide sequence around mRNA_37 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8400 and 8401 are separated by 355 nucleotides8401 and 8402 are separated by 145 nucleotides8402 and 8403 are separated by 657 nucleotides8403 and 8404 are separated by 170 nucleotides8404 and 8405 are separated by 760 nucleotides8405 and 8406 are separated by 409 nucleotides8406 and 8407 are separated by 428 nucleotides8407 and 8408 are separated by 368 nucleotides8408 and 8409 are separated by 327 nucleotides8409 and 8410 are separated by 199 nucleotides mRNA_32: 8400 - HMMPfam-Pre-rRNA-processing protein TSR2-PF10273, at 78,127 to 78,849 8400 mRNA_33: 8401 - HMMPfam-Myosin-binding striated muscle assembly central-PF11701,SUPERFAMILY--SSF48371, at 79,205 to 81,384 8401 mRNA_34: 8402 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 81,530 to 84,325 8402 mRNA_35: 8403 - KOG1611 Predicted short chain-type dehydrogenase, at 84,983 to 86,013 8403 mRNA_36: 8404 - K00694 bcsA cellulose synthase (UDP-forming), at 86,184 to 90,147 8404 mRNA_37: 8405 - HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 90,908 to 93,083 8405 mRNA_38: 8406 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 93,493 to 94,436 8406 mRNA_39: 8407 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695, at 94,865 to 95,759 8407 mRNA_40: 8408 - Hypothetical Protein, at 96,128 to 97,227 8408 mRNA_41: 8409 - K03125 TAF1 transcription initiation factor TFIID subunit 1, at 97,555 to 101,757 8409 mRNA_42: 8410 - K09494 CCT2 T-complex protein 1 subunit beta, at 101,957 to 104,570 8410
Locus Name Description Strand Phenotype
mRNA_32 8400 HMMPfam-Pre-rRNA-processing protein TSR2-PF10273 - no data
mRNA_33 8401 HMMPfam-Myosin-binding striated muscle assembly central-PF11701,SUPERFAMILY--SSF48371 - strong
mRNA_34 8402 BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ... - strong
mRNA_35 8403 KOG1611 Predicted short chain-type dehydrogenase + insig.
mRNA_36 8404 K00694 bcsA cellulose synthase (UDP-forming) - cofit
mRNA_37 8405 HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044 + cofit
mRNA_38 8406 HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097 - cofit
mRNA_39 8407 HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695 - insig.
mRNA_40 8408 Hypothetical Protein - cofit
mRNA_41 8409 K03125 TAF1 transcription initiation factor TFIID subunit 1 + no data
mRNA_42 8410 K09494 CCT2 T-complex protein 1 subunit beta - no data

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