Gene info for mRNA_41 in Rhodosporidium toruloides IFO0880

Name: 8409
Annotation: K03125 TAF1 transcription initiation factor TFIID subunit 1
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 97,555 to 101,757
See nucleotide sequence around mRNA_41 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8404 and 8405 are separated by 760 nucleotides8405 and 8406 are separated by 409 nucleotides8406 and 8407 are separated by 428 nucleotides8407 and 8408 are separated by 368 nucleotides8408 and 8409 are separated by 327 nucleotides8409 and 8410 are separated by 199 nucleotides8410 and 8411 are separated by 191 nucleotides8411 and 8412 are separated by 224 nucleotides8412 and 8413 are separated by 170 nucleotides8413 and 8414 are separated by 372 nucleotides mRNA_36: 8404 - K00694 bcsA cellulose synthase (UDP-forming), at 86,184 to 90,147 8404 mRNA_37: 8405 - HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 90,908 to 93,083 8405 mRNA_38: 8406 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 93,493 to 94,436 8406 mRNA_39: 8407 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695, at 94,865 to 95,759 8407 mRNA_40: 8408 - Hypothetical Protein, at 96,128 to 97,227 8408 mRNA_41: 8409 - K03125 TAF1 transcription initiation factor TFIID subunit 1, at 97,555 to 101,757 8409 mRNA_42: 8410 - K09494 CCT2 T-complex protein 1 subunit beta, at 101,957 to 104,570 8410 mRNA_43: 8411 - K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3, at 104,762 to 105,972 8411 mRNA_44: 8412 - Hypothetical Protein, at 106,197 to 108,340 8412 mRNA_45: 8413 - SUPERFAMILY--SSF51445, at 108,511 to 110,701 8413 mRNA_46: 8414 - HMMPfam-Protein of unknown function (DUF3292)-PF11696, at 111,074 to 114,249 8414
Locus Name Description Strand Phenotype
mRNA_36 8404 K00694 bcsA cellulose synthase (UDP-forming) - cofit
mRNA_37 8405 HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044 + cofit
mRNA_38 8406 HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097 - cofit
mRNA_39 8407 HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695 - insig.
mRNA_40 8408 Hypothetical Protein - cofit
mRNA_41 8409 K03125 TAF1 transcription initiation factor TFIID subunit 1 + no data
mRNA_42 8410 K09494 CCT2 T-complex protein 1 subunit beta - no data
mRNA_43 8411 K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3 + cofit
mRNA_44 8412 Hypothetical Protein + insig.
mRNA_45 8413 SUPERFAMILY--SSF51445 - cofit
mRNA_46 8414 HMMPfam-Protein of unknown function (DUF3292)-PF11696 + cofit

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