Gene info for mRNA_220 in Rhodosporidium toruloides IFO0880

Name: 8588
Annotation: K11159 K11159 carotenoid cleavage dioxygenase
Type 1: Protein-coding gene
Located on scaffold scaffold_1, - strand, nucleotides 542,754 to 544,832
See nucleotide sequence around mRNA_220 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8583 and 8584 are separated by 290 nucleotides8584 and 8585 are separated by 340 nucleotides8585 and 8586 are separated by 38 nucleotides8586 and 8587 are separated by 398 nucleotides8587 and 8588 are separated by 330 nucleotides8588 and 8589 are separated by 482 nucleotides8589 and 8590 are separated by 215 nucleotides8590 and 8591 are separated by 210 nucleotides8591 and 8592 are separated by 1119 nucleotides8592 and 8593 are separated by 423 nucleotides mRNA_215: 8583 - Hypothetical Protein, at 533,781 to 534,618 8583 mRNA_216: 8584 - BLAST protein of choline transporter-like family [Rhodo..., at 534,909 to 538,209 8584 mRNA_217: 8585 - K02292 crtO beta-carotene ketolase (CrtO type), at 538,550 to 540,960 8585 mRNA_218: 8586 - Hypothetical Protein, at 540,999 to 541,232 8586 mRNA_219: 8587 - Hypothetical Protein, at 541,631 to 542,423 8587 mRNA_220: 8588 - K11159 K11159 carotenoid cleavage dioxygenase, at 542,754 to 544,832 8588 mRNA_221: 8589 - HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462, at 545,315 to 547,571 8589 mRNA_222: 8590 - K12795 SUGT1, SGT1 suppressor of G2 allele of SKP1, at 547,787 to 548,767 8590 mRNA_223: 8591 - HMMPfam-Protein of unknown function (DUF1212)-PF06738,HMMPfam-Protein of unknown function (DUF3815)-PF12821, at 548,978 to 553,115 8591 mRNA_224: 8592 - K07300 chaA, CAX Ca2+-H+ antiporter, at 554,235 to 556,538 8592 mRNA_225: 8593 - KOG0619 FOG Leucine rich repeat, at 556,962 to 559,070 8593
Locus Name Description Strand Phenotype
mRNA_215 8583 Hypothetical Protein - cofit
mRNA_216 8584 BLAST protein of choline transporter-like family [Rhodo... + cofit
mRNA_217 8585 K02292 crtO beta-carotene ketolase (CrtO type) - cofit
mRNA_218 8586 Hypothetical Protein - cofit
mRNA_219 8587 Hypothetical Protein - cofit
mRNA_220 8588 K11159 K11159 carotenoid cleavage dioxygenase - cofit
mRNA_221 8589 HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462 + sig.
mRNA_222 8590 K12795 SUGT1, SGT1 suppressor of G2 allele of SKP1 - no data
mRNA_223 8591 HMMPfam-Protein of unknown function (DUF1212)-PF06738,HMMPfam-Protein of unknown function (DUF3815)-PF12821 - insig.
mRNA_224 8592 K07300 chaA, CAX Ca2+-H+ antiporter - cofit
mRNA_225 8593 KOG0619 FOG Leucine rich repeat - cofit

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