Gene info for mRNA_224 in Rhodosporidium toruloides IFO0880

Name: 8592
Annotation: K07300 chaA, CAX Ca2+-H+ antiporter
Type 1: Protein-coding gene
Located on scaffold scaffold_1, - strand, nucleotides 554,235 to 556,538
See nucleotide sequence around mRNA_224 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8587 and 8588 are separated by 330 nucleotides8588 and 8589 are separated by 482 nucleotides8589 and 8590 are separated by 215 nucleotides8590 and 8591 are separated by 210 nucleotides8591 and 8592 are separated by 1119 nucleotides8592 and 8593 are separated by 423 nucleotides8593 and 8594 are separated by 83 nucleotides8594 and 8595 are separated by 246 nucleotides8595 and 8596 are separated by 651 nucleotides8596 and 8597 are separated by 168 nucleotides mRNA_219: 8587 - Hypothetical Protein, at 541,631 to 542,423 8587 mRNA_220: 8588 - K11159 K11159 carotenoid cleavage dioxygenase, at 542,754 to 544,832 8588 mRNA_221: 8589 - HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462, at 545,315 to 547,571 8589 mRNA_222: 8590 - K12795 SUGT1, SGT1 suppressor of G2 allele of SKP1, at 547,787 to 548,767 8590 mRNA_223: 8591 - HMMPfam-Protein of unknown function (DUF1212)-PF06738,HMMPfam-Protein of unknown function (DUF3815)-PF12821, at 548,978 to 553,115 8591 mRNA_224: 8592 - K07300 chaA, CAX Ca2+-H+ antiporter, at 554,235 to 556,538 8592 mRNA_225: 8593 - KOG0619 FOG Leucine rich repeat, at 556,962 to 559,070 8593 mRNA_226: 8594 - KOG2861 Uncharacterized conserved protein, at 559,154 to 560,792 8594 mRNA_227: 8595 - K03259 EIF4E translation initiation factor 4E, at 561,039 to 562,506 8595 mRNA_228: 8596 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 563,158 to 565,625 8596 mRNA_229: 8597 - Hypothetical Protein, at 565,794 to 566,303 8597
Locus Name Description Strand Phenotype
mRNA_219 8587 Hypothetical Protein - cofit
mRNA_220 8588 K11159 K11159 carotenoid cleavage dioxygenase - cofit
mRNA_221 8589 HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462 + sig.
mRNA_222 8590 K12795 SUGT1, SGT1 suppressor of G2 allele of SKP1 - no data
mRNA_223 8591 HMMPfam-Protein of unknown function (DUF1212)-PF06738,HMMPfam-Protein of unknown function (DUF3815)-PF12821 - insig.
mRNA_224 8592 K07300 chaA, CAX Ca2+-H+ antiporter - cofit
mRNA_225 8593 KOG0619 FOG Leucine rich repeat - cofit
mRNA_226 8594 KOG2861 Uncharacterized conserved protein + cofit
mRNA_227 8595 K03259 EIF4E translation initiation factor 4E - cofit
mRNA_228 8596 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) + cofit
mRNA_229 8597 Hypothetical Protein - cofit

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