Gene info for mRNA_253 in Rhodosporidium toruloides IFO0880

Name: 8621
Annotation: KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 611,030 to 612,229
See nucleotide sequence around mRNA_253 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8616 and 8617 are separated by 175 nucleotides8617 and 8618 are separated by 832 nucleotides8618 and 8619 are separated by 136 nucleotides8619 and 8620 are separated by 168 nucleotides8620 and 8621 are separated by 159 nucleotides8621 and 8622 are separated by 292 nucleotides8622 and 8623 are separated by 297 nucleotides8623 and 8624 are separated by 273 nucleotides8624 and 8625 are separated by 698 nucleotides8625 and 8626 are separated by 720 nucleotides mRNA_248: 8616 - K01796 E5.1.99.4, AMACR, mcr alpha-methylacyl-CoA racemase, at 603,396 to 605,038 8616 mRNA_249: 8617 - K03538 POP4, RPP29 ribonuclease P protein subunit POP4, at 605,214 to 606,480 8617 mRNA_250: 8618 - K19245 JLP1 sulfonate dioxygenase, at 607,313 to 608,781 8618 mRNA_251: 8619 - HMMPfam-ACT domain-PF13840,PIRSF--PIRSF008459,SUPERFAMILY--SSF55021, at 608,918 to 609,439 8619 mRNA_252: 8620 - Hypothetical Protein, at 609,608 to 610,870 8620 mRNA_253: 8621 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 611,030 to 612,229 8621 mRNA_254: 8622 - KOG0970 DNA polymerase alpha, catalytic subunit, at 612,522 to 613,328 8622 mRNA_255: 8623 - K02320 POLA1 DNA polymerase alpha subunit A, at 613,626 to 618,274 8623 mRNA_256: 8624 - K11254 H4 histone H4, at 618,548 to 619,064 8624 mRNA_257: 8625 - KOG1745 Histones H3 and H4, at 619,763 to 620,480 8625 mRNA_258: 8626 - HMMPfam-Eukaryotic protein of unknown function (DUF1764)-PF08576, at 621,201 to 621,954 8626
Locus Name Description Strand Phenotype
mRNA_248 8616 K01796 E5.1.99.4, AMACR, mcr alpha-methylacyl-CoA racemase - insig.
mRNA_249 8617 K03538 POP4, RPP29 ribonuclease P protein subunit POP4 + no data
mRNA_250 8618 K19245 JLP1 sulfonate dioxygenase + cofit
mRNA_251 8619 HMMPfam-ACT domain-PF13840,PIRSF--PIRSF008459,SUPERFAMILY--SSF55021 - cofit
mRNA_252 8620 Hypothetical Protein - cofit
mRNA_253 8621 KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins + cofit
mRNA_254 8622 KOG0970 DNA polymerase alpha, catalytic subunit + no data
mRNA_255 8623 K02320 POLA1 DNA polymerase alpha subunit A + no data
mRNA_256 8624 K11254 H4 histone H4 - cofit
mRNA_257 8625 KOG1745 Histones H3 and H4 + no data
mRNA_258 8626 HMMPfam-Eukaryotic protein of unknown function (DUF1764)-PF08576 - no data

Or browse nearby genes

Or see the comparative fitness browser