Gene info for mRNA_259 in Rhodosporidium toruloides IFO0880

Name: 8627
Annotation: HMMPfam-Domain of unknown function (DUF1771)-PF08590,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,ProSiteProfiles-Smr domain profile.-PS50828,SMART-zinc finger-SM00356
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 622,490 to 625,658
See nucleotide sequence around mRNA_259 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8622 and 8623 are separated by 297 nucleotides8623 and 8624 are separated by 273 nucleotides8624 and 8625 are separated by 698 nucleotides8625 and 8626 are separated by 720 nucleotides8626 and 8627 are separated by 535 nucleotides8627 and 8628 are separated by 251 nucleotides8628 and 8629 are separated by 19 nucleotides8629 and 8630 are separated by 264 nucleotides8630 and 8631 are separated by 832 nucleotides8631 and 8632 are separated by 1458 nucleotides mRNA_254: 8622 - KOG0970 DNA polymerase alpha, catalytic subunit, at 612,522 to 613,328 8622 mRNA_255: 8623 - K02320 POLA1 DNA polymerase alpha subunit A, at 613,626 to 618,274 8623 mRNA_256: 8624 - K11254 H4 histone H4, at 618,548 to 619,064 8624 mRNA_257: 8625 - KOG1745 Histones H3 and H4, at 619,763 to 620,480 8625 mRNA_258: 8626 - HMMPfam-Eukaryotic protein of unknown function (DUF1764)-PF08576, at 621,201 to 621,954 8626 mRNA_259: 8627 - HMMPfam-Domain of unknown function (DUF1771)-PF08590,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,ProSiteProfiles-Smr domain profile.-PS50828,SMART-zinc finger-SM00356, at 622,490 to 625,658 8627 mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625,910 to 627,593 8628 mRNA_261: 8629 - KOG1745 Histones H3 and H4, at 627,613 to 628,433 8629 mRNA_262: 8630 - HMMPfam-Flavin reductase like domain-PF01613, at 628,698 to 628,997 8630 mRNA_263: 8631 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 629,830 to 634,837 8631 mRNA_264: 8632 - BLAST phosphoglycerate mutase-like protein [Sanghuangporus ..., at 636,296 to 637,192 8632
Locus Name Description Strand Phenotype
mRNA_254 8622 KOG0970 DNA polymerase alpha, catalytic subunit + no data
mRNA_255 8623 K02320 POLA1 DNA polymerase alpha subunit A + no data
mRNA_256 8624 K11254 H4 histone H4 - cofit
mRNA_257 8625 KOG1745 Histones H3 and H4 + no data
mRNA_258 8626 HMMPfam-Eukaryotic protein of unknown function (DUF1764)-PF08576 - no data
mRNA_259 8627 HMMPfam-Domain of unknown function (DUF1771)-PF08590,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,ProSiteProfiles-Smr domain profile.-PS50828,SMART-zinc finger-SM00356 + cofit
mRNA_260 8628 KOG2534 DNA polymerase IV (family X) + cofit
mRNA_261 8629 KOG1745 Histones H3 and H4 + insig.
mRNA_262 8630 HMMPfam-Flavin reductase like domain-PF01613 - no data
mRNA_263 8631 K01537 E3.6.3.8 Ca2+-transporting ATPase - cofit
mRNA_264 8632 BLAST phosphoglycerate mutase-like protein [Sanghuangporus ... + cofit

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