Gene info for mRNA_268 in Rhodosporidium toruloides IFO0880

Name: 8636
Annotation: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 642,489 to 643,919
See nucleotide sequence around mRNA_268 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8631 and 8632 are separated by 1458 nucleotides8632 and 8633 are separated by 286 nucleotides8633 and 8634 are separated by 141 nucleotides8634 and 8635 are separated by 345 nucleotides8635 and 8636 are separated by 253 nucleotides8636 and 8637 are separated by 129 nucleotides8637 and 8638 are separated by 272 nucleotides8638 and 8639 are separated by 317 nucleotides8639 and 8640 are separated by 531 nucleotides8640 and 8641 are separated by 380 nucleotides mRNA_263: 8631 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 629,830 to 634,837 8631 mRNA_264: 8632 - BLAST phosphoglycerate mutase-like protein [Sanghuangporus ..., at 636,296 to 637,192 8632 mRNA_265: 8633 - K00876 udk, UCK uridine kinase, at 637,479 to 639,717 8633 mRNA_266: 8634 - KOG0111 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, at 639,859 to 640,522 8634 mRNA_267: 8635 - K03381 catA catechol 1,2-dioxygenase, at 640,868 to 642,235 8635 mRNA_268: 8636 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 642,489 to 643,919 8636 mRNA_269: 8637 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 644,049 to 645,349 8637 mRNA_270: 8638 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 645,622 to 646,120 8638 mRNA_271: 8639 - K11262 ACACA acetyl-CoA carboxylase / biotin carboxylase 1, at 646,438 to 653,784 8639 mRNA_272: 8640 - KOG4178 Soluble epoxide hydrolase, at 654,316 to 655,397 8640 mRNA_273: 8641 - K15174 PAF1 RNA polymerase II-associated factor 1, at 655,778 to 657,591 8641
Locus Name Description Strand Phenotype
mRNA_263 8631 K01537 E3.6.3.8 Ca2+-transporting ATPase - cofit
mRNA_264 8632 BLAST phosphoglycerate mutase-like protein [Sanghuangporus ... + cofit
mRNA_265 8633 K00876 udk, UCK uridine kinase + cofit
mRNA_266 8634 KOG0111 Cyclophilin-type peptidyl-prolyl cis-trans isomerase - no data
mRNA_267 8635 K03381 catA catechol 1,2-dioxygenase - insig.
mRNA_268 8636 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + insig.
mRNA_269 8637 BLAST nitrogen assimilation transcription factor [Rhodo... + cofit
mRNA_270 8638 BLAST protein of unknown function [Taphrina deformans PYCC ... - no data
mRNA_271 8639 K11262 ACACA acetyl-CoA carboxylase / biotin carboxylase 1 - no data
mRNA_272 8640 KOG4178 Soluble epoxide hydrolase - cofit
mRNA_273 8641 K15174 PAF1 RNA polymerase II-associated factor 1 + cofit

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