Gene info for mRNA_479 in Rhodosporidium toruloides IFO0880

Name: 8847
Annotation: K17302 COPB2, SEC27 coatomer subunit beta'
Type 1: Protein-coding gene
Located on scaffold scaffold_1, - strand, nucleotides 1,114,132 to 1,117,214
See nucleotide sequence around mRNA_479 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8842 and 8843 are separated by 366 nucleotides8843 and 8844 are separated by 519 nucleotides8844 and 8845 are separated by 1530 nucleotides8845 and 8846 are separated by 575 nucleotides8846 and 8847 are separated by 644 nucleotides8847 and 8848 are separated by 527 nucleotides8848 and 8849 are separated by 249 nucleotides8849 and 8850 are separated by 21985 nucleotides8850 and 8851 are separated by 3106 nucleotides8851 and 8852 are separated by 638 nucleotides mRNA_474: 8842 - Hypothetical Protein, at 1,101,905 to 1,103,305 8842 mRNA_475: 8843 - K15153 MED31, SOH1 mediator of RNA polymerase II transcription subunit 31, at 1,103,672 to 1,105,927 8843 mRNA_476: 8844 - K02951 RP-S12e, RPS12 small subunit ribosomal protein S12e, at 1,106,447 to 1,107,237 8844 mRNA_477: 8845 - K10256 FAD2 omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase), at 1,108,768 to 1,110,470 8845 mRNA_478: 8846 - HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,111,046 to 1,113,487 8846 mRNA_479: 8847 - K17302 COPB2, SEC27 coatomer subunit beta', at 1,114,132 to 1,117,214 8847 mRNA_480: 8848 - ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689, at 1,117,742 to 1,121,401 8848 mRNA_481: 8849 - K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2, at 1,121,651 to 1,124,733 8849 mRNA_482: 8850 - Hypothetical Protein, at 1,146,719 to 1,146,997 8850 mRNA_483: 8851 - KOG1339 Aspartyl protease, at 1,150,104 to 1,151,338 8851 mRNA_484: 8852 - Hypothetical Protein, at 1,151,977 to 1,154,074 8852
Locus Name Description Strand Phenotype
mRNA_474 8842 Hypothetical Protein - cofit
mRNA_475 8843 K15153 MED31, SOH1 mediator of RNA polymerase II transcription subunit 31 - cofit
mRNA_476 8844 K02951 RP-S12e, RPS12 small subunit ribosomal protein S12e + no data
mRNA_477 8845 K10256 FAD2 omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) - no data
mRNA_478 8846 HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452 - insig.
mRNA_479 8847 K17302 COPB2, SEC27 coatomer subunit beta' - no data
mRNA_480 8848 ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689 + cofit
mRNA_481 8849 K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2 - insig.
mRNA_482 8850 Hypothetical Protein - cofit
mRNA_483 8851 KOG1339 Aspartyl protease - cofit
mRNA_484 8852 Hypothetical Protein - cofit

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