Gene info for mRNA_483 in Rhodosporidium toruloides IFO0880

Name: 8851
Annotation: KOG1339 Aspartyl protease
Type 1: Protein-coding gene
Located on scaffold scaffold_1, - strand, nucleotides 1,150,104 to 1,151,338
See nucleotide sequence around mRNA_483 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8846 and 8847 are separated by 644 nucleotides8847 and 8848 are separated by 527 nucleotides8848 and 8849 are separated by 249 nucleotides8849 and 8850 are separated by 21985 nucleotides8850 and 8851 are separated by 3106 nucleotides8851 and 8852 are separated by 638 nucleotides8852 and 8853 are separated by 412 nucleotides8853 and 8854 are separated by 190 nucleotides8854 and 8855 are separated by 283 nucleotides8855 and 8856 are separated by 216 nucleotides mRNA_478: 8846 - HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1,111,046 to 1,113,487 8846 mRNA_479: 8847 - K17302 COPB2, SEC27 coatomer subunit beta', at 1,114,132 to 1,117,214 8847 mRNA_480: 8848 - ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689, at 1,117,742 to 1,121,401 8848 mRNA_481: 8849 - K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2, at 1,121,651 to 1,124,733 8849 mRNA_482: 8850 - Hypothetical Protein, at 1,146,719 to 1,146,997 8850 mRNA_483: 8851 - KOG1339 Aspartyl protease, at 1,150,104 to 1,151,338 8851 mRNA_484: 8852 - Hypothetical Protein, at 1,151,977 to 1,154,074 8852 mRNA_485: 8853 - K13278 ASPG 60kDa lysophospholipase, at 1,154,487 to 1,156,857 8853 mRNA_486: 8854 - HMMPfam-Domain of unknown function (DUF202)-PF02656, at 1,157,048 to 1,157,778 8854 mRNA_487: 8855 - HMMPfam-Thioredoxin-PF00085,HMMPfam-PITH domain-PF06201,PRINTS-Thioredoxin family signature-PR00421,ProSitePatterns-Thioredoxin family active site.-PS00194,ProSiteProfiles-Thioredoxin domain profile.-PS51352,ProSiteProfiles-PITH domain profile.-PS51532,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF52833, at 1,158,062 to 1,159,223 8855 mRNA_488: 8856 - Hypothetical Protein, at 1,159,440 to 1,160,357 8856
Locus Name Description Strand Phenotype
mRNA_478 8846 HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452 - insig.
mRNA_479 8847 K17302 COPB2, SEC27 coatomer subunit beta' - no data
mRNA_480 8848 ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689 + cofit
mRNA_481 8849 K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2 - insig.
mRNA_482 8850 Hypothetical Protein - cofit
mRNA_483 8851 KOG1339 Aspartyl protease - cofit
mRNA_484 8852 Hypothetical Protein - cofit
mRNA_485 8853 K13278 ASPG 60kDa lysophospholipase + cofit
mRNA_486 8854 HMMPfam-Domain of unknown function (DUF202)-PF02656 + insig.
mRNA_487 8855 HMMPfam-Thioredoxin-PF00085,HMMPfam-PITH domain-PF06201,PRINTS-Thioredoxin family signature-PR00421,ProSitePatterns-Thioredoxin family active site.-PS00194,ProSiteProfiles-Thioredoxin domain profile.-PS51352,ProSiteProfiles-PITH domain profile.-PS51532,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF52833 + no data
mRNA_488 8856 Hypothetical Protein - no data

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