Gene info for mRNA_487 in Rhodosporidium toruloides IFO0880

Name: 8855
Annotation: HMMPfam-Thioredoxin-PF00085,HMMPfam-PITH domain-PF06201,PRINTS-Thioredoxin family signature-PR00421,ProSitePatterns-Thioredoxin family active site.-PS00194,ProSiteProfiles-Thioredoxin domain profile.-PS51352,ProSiteProfiles-PITH domain profile.-PS51532,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF52833
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 1,158,062 to 1,159,223
See nucleotide sequence around mRNA_487 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8850 and 8851 are separated by 3106 nucleotides8851 and 8852 are separated by 638 nucleotides8852 and 8853 are separated by 412 nucleotides8853 and 8854 are separated by 190 nucleotides8854 and 8855 are separated by 283 nucleotides8855 and 8856 are separated by 216 nucleotides8856 and 8857 are separated by 1764 nucleotides8857 and 8858 are separated by 254 nucleotides8858 and 8859 are separated by 408 nucleotides8859 and 8860 are separated by 32 nucleotides mRNA_482: 8850 - Hypothetical Protein, at 1,146,719 to 1,146,997 8850 mRNA_483: 8851 - KOG1339 Aspartyl protease, at 1,150,104 to 1,151,338 8851 mRNA_484: 8852 - Hypothetical Protein, at 1,151,977 to 1,154,074 8852 mRNA_485: 8853 - K13278 ASPG 60kDa lysophospholipase, at 1,154,487 to 1,156,857 8853 mRNA_486: 8854 - HMMPfam-Domain of unknown function (DUF202)-PF02656, at 1,157,048 to 1,157,778 8854 mRNA_487: 8855 - HMMPfam-Thioredoxin-PF00085,HMMPfam-PITH domain-PF06201,PRINTS-Thioredoxin family signature-PR00421,ProSitePatterns-Thioredoxin family active site.-PS00194,ProSiteProfiles-Thioredoxin domain profile.-PS51352,ProSiteProfiles-PITH domain profile.-PS51532,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF52833, at 1,158,062 to 1,159,223 8855 mRNA_488: 8856 - Hypothetical Protein, at 1,159,440 to 1,160,357 8856 mRNA_489: 8857 - K07179 RIOK2 RIO kinase 2, at 1,162,122 to 1,163,780 8857 mRNA_490: 8858 - SUPERFAMILY--SSF52058, at 1,164,035 to 1,165,589 8858 mRNA_491: 8859 - K00850 pfkA, PFK 6-phosphofructokinase 1, at 1,165,998 to 1,167,980 8859 mRNA_492: 8860 - KOG0908 Thioredoxin-like protein, at 1,168,013 to 1,168,885 8860
Locus Name Description Strand Phenotype
mRNA_482 8850 Hypothetical Protein - cofit
mRNA_483 8851 KOG1339 Aspartyl protease - cofit
mRNA_484 8852 Hypothetical Protein - cofit
mRNA_485 8853 K13278 ASPG 60kDa lysophospholipase + cofit
mRNA_486 8854 HMMPfam-Domain of unknown function (DUF202)-PF02656 + insig.
mRNA_487 8855 HMMPfam-Thioredoxin-PF00085,HMMPfam-PITH domain-PF06201,PRINTS-Thioredoxin family signature-PR00421,ProSitePatterns-Thioredoxin family active site.-PS00194,ProSiteProfiles-Thioredoxin domain profile.-PS51352,ProSiteProfiles-PITH domain profile.-PS51532,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF52833 + no data
mRNA_488 8856 Hypothetical Protein - no data
mRNA_489 8857 K07179 RIOK2 RIO kinase 2 - no data
mRNA_490 8858 SUPERFAMILY--SSF52058 - no data
mRNA_491 8859 K00850 pfkA, PFK 6-phosphofructokinase 1 - no data
mRNA_492 8860 KOG0908 Thioredoxin-like protein + no data

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