Gene info for mRNA_558 in Rhodosporidium toruloides IFO0880

Name: 8926
Annotation: HMMPfam-SH3 domain-PF00018,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044
Type 1: Protein-coding gene
Located on scaffold scaffold_1, - strand, nucleotides 1,329,845 to 1,332,752
See nucleotide sequence around mRNA_558 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8921 and 8922 are separated by 1009 nucleotides8922 and 8923 are separated by 445 nucleotides8923 and 8924 are separated by 288 nucleotides8924 and 8925 are separated by 728 nucleotides8925 and 8926 are separated by 834 nucleotides8926 and 8927 are separated by 645 nucleotides8927 and 8928 are separated by 1430 nucleotides8928 and 8929 are separated by 355 nucleotides8929 and 8930 are separated by 539 nucleotides8930 and 8931 are separated by 198 nucleotides mRNA_553: 8921 - KOG0907 Thioredoxin, at 1,318,121 to 1,318,450 8921 mRNA_554: 8922 - K13337 PEX19 peroxin-19, at 1,319,460 to 1,321,018 8922 mRNA_555: 8923 - K03115 CSNK2B casein kinase II subunit beta, at 1,321,464 to 1,322,533 8923 mRNA_556: 8924 - HMMPfam-Acetyltransferase (GNAT) domain-PF13302,SUPERFAMILY--SSF55729, at 1,322,822 to 1,323,921 8924 mRNA_557: 8925 - HMMPfam-Ras association (RalGDS/AF-6) domain-PF00788,ProSiteProfiles-Ras-associating (RA) domain profile.-PS50200,SMART-Ras association (RalGDS/AF-6) domain-SM00314,SUPERFAMILY--SSF54236, at 1,324,650 to 1,329,010 8925 mRNA_558: 8926 - HMMPfam-SH3 domain-PF00018,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 1,329,845 to 1,332,752 8926 mRNA_559: 8927 - KOG4672 Uncharacterized conserved low complexity protein, at 1,333,398 to 1,335,053 8927 mRNA_560: 8928 - Hypothetical Protein, at 1,336,484 to 1,340,949 8928 mRNA_561: 8929 - Hypothetical Protein, at 1,341,305 to 1,346,099 8929 mRNA_562: 8930 - HMMPfam-HPC2 and ubinuclein domain-PF08729, at 1,346,639 to 1,349,486 8930 mRNA_563: 8931 - K05287 PIGF phosphatidylinositol glycan, class F, at 1,349,685 to 1,350,957 8931
Locus Name Description Strand Phenotype
mRNA_553 8921 KOG0907 Thioredoxin - no data
mRNA_554 8922 K13337 PEX19 peroxin-19 - no data
mRNA_555 8923 K03115 CSNK2B casein kinase II subunit beta + no data
mRNA_556 8924 HMMPfam-Acetyltransferase (GNAT) domain-PF13302,SUPERFAMILY--SSF55729 - cofit
mRNA_557 8925 HMMPfam-Ras association (RalGDS/AF-6) domain-PF00788,ProSiteProfiles-Ras-associating (RA) domain profile.-PS50200,SMART-Ras association (RalGDS/AF-6) domain-SM00314,SUPERFAMILY--SSF54236 - cofit
mRNA_558 8926 HMMPfam-SH3 domain-PF00018,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044 - no data
mRNA_559 8927 KOG4672 Uncharacterized conserved low complexity protein + cofit
mRNA_560 8928 Hypothetical Protein - insig.
mRNA_561 8929 Hypothetical Protein - cofit
mRNA_562 8930 HMMPfam-HPC2 and ubinuclein domain-PF08729 + insig.
mRNA_563 8931 K05287 PIGF phosphatidylinositol glycan, class F + cofit

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