Gene info for mRNA_585 in Rhodosporidium toruloides IFO0880

Name: 8953
Annotation: HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784
Type 1: Protein-coding gene
Located on scaffold scaffold_1, - strand, nucleotides 1,396,746 to 1,398,490
See nucleotide sequence around mRNA_585 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8948 and 8949 are separated by 430 nucleotides8949 and 8950 are separated by 116 nucleotides8950 and 8951 are separated by 100 nucleotides8951 and 8952 are separated by 145 nucleotides8952 and 8953 are separated by 314 nucleotides8953 and 8954 are separated by 164 nucleotides8954 and 8955 are separated by 348 nucleotides8955 and 8956 are separated by 802 nucleotides8956 and 8957 are separated by 4105 nucleotides8957 and 8958 are separated by 274 nucleotides mRNA_580: 8948 - Hypothetical Protein, at 1,388,734 to 1,389,540 8948 mRNA_581: 8949 - Interpro ERCC4 domain 0, at 1,389,971 to 1,392,481 8949 mRNA_582: 8950 - K02876 RP-L15, MRPL15, rplO large subunit ribosomal protein L15, at 1,392,598 to 1,393,775 8950 mRNA_583: 8951 - HMMPfam-Protein of Unknown function (DUF1690)-PF07956, at 1,393,876 to 1,394,660 8951 mRNA_584: 8952 - K01259 pip proline iminopeptidase, at 1,394,806 to 1,396,431 8952 mRNA_585: 8953 - HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784, at 1,396,746 to 1,398,490 8953 mRNA_586: 8954 - K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4, at 1,398,655 to 1,401,525 8954 mRNA_587: 8955 - K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5, at 1,401,874 to 1,405,590 8955 mRNA_588: 8956 - K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120, at 1,406,393 to 1,408,614 8956 mRNA_589: 8957 - KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger, at 1,412,720 to 1,414,364 8957 mRNA_590: 8958 - K05543 DUS2 tRNA-dihydrouridine synthase 2, at 1,414,639 to 1,416,336 8958
Locus Name Description Strand Phenotype
mRNA_580 8948 Hypothetical Protein + cofit
mRNA_581 8949 Interpro ERCC4 domain 0 + cofit
mRNA_582 8950 K02876 RP-L15, MRPL15, rplO large subunit ribosomal protein L15 - no data
mRNA_583 8951 HMMPfam-Protein of Unknown function (DUF1690)-PF07956 + cofit
mRNA_584 8952 K01259 pip proline iminopeptidase - cofit
mRNA_585 8953 HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784 - cofit
mRNA_586 8954 K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4 - no data
mRNA_587 8955 K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5 + cofit
mRNA_588 8956 K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120 + cofit
mRNA_589 8957 KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger - cofit
mRNA_590 8958 K05543 DUS2 tRNA-dihydrouridine synthase 2 + no data

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