Gene info for mRNA_588 in Rhodosporidium toruloides IFO0880

Name: 8956
Annotation: K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 1,406,393 to 1,408,614
See nucleotide sequence around mRNA_588 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 8951 and 8952 are separated by 145 nucleotides8952 and 8953 are separated by 314 nucleotides8953 and 8954 are separated by 164 nucleotides8954 and 8955 are separated by 348 nucleotides8955 and 8956 are separated by 802 nucleotides8956 and 8957 are separated by 4105 nucleotides8957 and 8958 are separated by 274 nucleotides8958 and 8959 are separated by 114 nucleotides8959 and 8960 are separated by 126 nucleotides8960 and 8961 are separated by 334 nucleotides mRNA_583: 8951 - HMMPfam-Protein of Unknown function (DUF1690)-PF07956, at 1,393,876 to 1,394,660 8951 mRNA_584: 8952 - K01259 pip proline iminopeptidase, at 1,394,806 to 1,396,431 8952 mRNA_585: 8953 - HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784, at 1,396,746 to 1,398,490 8953 mRNA_586: 8954 - K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4, at 1,398,655 to 1,401,525 8954 mRNA_587: 8955 - K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5, at 1,401,874 to 1,405,590 8955 mRNA_588: 8956 - K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120, at 1,406,393 to 1,408,614 8956 mRNA_589: 8957 - KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger, at 1,412,720 to 1,414,364 8957 mRNA_590: 8958 - K05543 DUS2 tRNA-dihydrouridine synthase 2, at 1,414,639 to 1,416,336 8958 mRNA_591: 8959 - K01915 glnA, GLUL glutamine synthetase, at 1,416,451 to 1,418,413 8959 mRNA_592: 8960 - K10747 LIG1 DNA ligase 1, at 1,418,540 to 1,422,145 8960 mRNA_593: 8961 - K18469 TBC1D5 TBC1 domain family member 5, at 1,422,480 to 1,425,082 8961
Locus Name Description Strand Phenotype
mRNA_583 8951 HMMPfam-Protein of Unknown function (DUF1690)-PF07956 + cofit
mRNA_584 8952 K01259 pip proline iminopeptidase - cofit
mRNA_585 8953 HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784 - cofit
mRNA_586 8954 K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4 - no data
mRNA_587 8955 K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5 + cofit
mRNA_588 8956 K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120 + cofit
mRNA_589 8957 KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger - cofit
mRNA_590 8958 K05543 DUS2 tRNA-dihydrouridine synthase 2 + no data
mRNA_591 8959 K01915 glnA, GLUL glutamine synthetase - cofit
mRNA_592 8960 K10747 LIG1 DNA ligase 1 + cofit
mRNA_593 8961 K18469 TBC1D5 TBC1 domain family member 5 + cofit

Or browse nearby genes

Or see the comparative fitness browser