Gene info for mRNA_735 in Rhodosporidium toruloides IFO0880

Name: 9103
Annotation: KOG0175 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 1,753,965 to 1,755,090
See nucleotide sequence around mRNA_735 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9098 and 9099 are separated by 314 nucleotides9099 and 9100 are separated by 382 nucleotides9100 and 9101 are separated by 42 nucleotides9101 and 9102 are separated by 395 nucleotides9102 and 9103 are separated by 755 nucleotides9103 and 9104 are separated by 153 nucleotides9104 and 9105 are separated by 309 nucleotides9105 and 9106 are separated by 580 nucleotides9106 and 9107 are separated by 1800 nucleotides9107 and 9108 are separated by 230 nucleotides mRNA_730: 9098 - KOG0061 Transporter, ABC superfamily (Breast cancer resistance protein), at 1,738,976 to 1,743,135 9098 mRNA_731: 9099 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1,743,450 to 1,746,549 9099 mRNA_732: 9100 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 1,746,932 to 1,748,724 9100 mRNA_733: 9101 - K13954 yiaY alcohol dehydrogenase, at 1,748,767 to 1,750,473 9101 mRNA_734: 9102 - K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12, at 1,750,869 to 1,753,209 9102 mRNA_735: 9103 - KOG0175 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2, at 1,753,965 to 1,755,090 9103 mRNA_736: 9104 - K00034 gdh glucose 1-dehydrogenase, at 1,755,244 to 1,756,596 9104 mRNA_737: 9105 - HMMPfam-EthD domain-PF07110,SUPERFAMILY--SSF54909,TIGRFAM-TIGR02118 conserved hypothetical protein-TIGR02118, at 1,756,906 to 1,757,418 9105 mRNA_738: 9106 - K06606 iolI 2-keto-myo-inositol isomerase, at 1,757,999 to 1,760,705 9106 mRNA_739: 9107 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 1,762,506 to 1,766,867 9107 mRNA_740: 9108 - K13103 TFIP11 tuftelin-interacting protein 11, at 1,767,098 to 1,770,950 9108
Locus Name Description Strand Phenotype
mRNA_730 9098 KOG0061 Transporter, ABC superfamily (Breast cancer resistance protein) - cofit
mRNA_731 9099 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - insig.
mRNA_732 9100 HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482 - cofit
mRNA_733 9101 K13954 yiaY alcohol dehydrogenase + cofit
mRNA_734 9102 K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12 - cofit
mRNA_735 9103 KOG0175 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2 + cofit
mRNA_736 9104 K00034 gdh glucose 1-dehydrogenase - cofit
mRNA_737 9105 HMMPfam-EthD domain-PF07110,SUPERFAMILY--SSF54909,TIGRFAM-TIGR02118 conserved hypothetical protein-TIGR02118 + no data
mRNA_738 9106 K06606 iolI 2-keto-myo-inositol isomerase - cofit
mRNA_739 9107 K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase + cofit
mRNA_740 9108 K13103 TFIP11 tuftelin-interacting protein 11 - no data

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