Gene info for mRNA_856 in Rhodosporidium toruloides IFO0880

Name: 9224
Annotation: KOG0828 Predicted E3 ubiquitin ligase
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 2,049,968 to 2,053,108
See nucleotide sequence around mRNA_856 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9219 and 9220 are separated by 73 nucleotides9220 and 9221 are separated by 308 nucleotides9221 and 9222 are separated by 75 nucleotides9222 and 9223 are separated by 286 nucleotides9223 and 9224 are separated by 172 nucleotides9224 and 9225 are separated by 165 nucleotides9225 and 9226 are separated by 504 nucleotides9226 and 9227 are separated by 180 nucleotides9227 and 9228 are separated by 212 nucleotides9228 and 9229 are separated by 217 nucleotides mRNA_851: 9219 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 2,039,418 to 2,042,658 9219 mRNA_852: 9220 - K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase, at 2,042,732 to 2,043,876 9220 mRNA_853: 9221 - K13125 NOSIP nitric oxide synthase-interacting protein, at 2,044,185 to 2,045,369 9221 mRNA_854: 9222 - K01620 ltaE threonine aldolase, at 2,045,445 to 2,046,969 9222 mRNA_855: 9223 - BLAST Phosphoribosyltransferase C-terminal [Ceraceosorus bo..., at 2,047,256 to 2,049,795 9223 mRNA_856: 9224 - KOG0828 Predicted E3 ubiquitin ligase, at 2,049,968 to 2,053,108 9224 mRNA_857: 9225 - K14565 NOP58 nucleolar protein 58, at 2,053,274 to 2,055,374 9225 mRNA_858: 9226 - K10599 PRPF19, PRP19 pre-mRNA-processing factor 19, at 2,055,879 to 2,057,799 9226 mRNA_859: 9227 - KOG1032 Uncharacterized conserved protein, contains GRAM domain, at 2,057,980 to 2,061,220 9227 mRNA_860: 9228 - HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268, at 2,061,433 to 2,063,574 9228 mRNA_861: 9229 - K03513 POLM DNA polymerase mu, at 2,063,792 to 2,065,447 9229
Locus Name Description Strand Phenotype
mRNA_851 9219 HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474 + cofit
mRNA_852 9220 K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase - no data
mRNA_853 9221 K13125 NOSIP nitric oxide synthase-interacting protein + cofit
mRNA_854 9222 K01620 ltaE threonine aldolase - cofit
mRNA_855 9223 BLAST Phosphoribosyltransferase C-terminal [Ceraceosorus bo... - cofit
mRNA_856 9224 KOG0828 Predicted E3 ubiquitin ligase + cofit
mRNA_857 9225 K14565 NOP58 nucleolar protein 58 - no data
mRNA_858 9226 K10599 PRPF19, PRP19 pre-mRNA-processing factor 19 + cofit
mRNA_859 9227 KOG1032 Uncharacterized conserved protein, contains GRAM domain + cofit
mRNA_860 9228 HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268 - cofit
mRNA_861 9229 K03513 POLM DNA polymerase mu - cofit

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