Gene info for mRNA_885 in Rhodosporidium toruloides IFO0880

Name: 9253
Annotation: K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12
Type 1: Protein-coding gene
Located on scaffold scaffold_1, + strand, nucleotides 2,111,584 to 2,117,077
See nucleotide sequence around mRNA_885 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9248 and 9249 are separated by 123 nucleotides9249 and 9250 are separated by 77 nucleotides9250 and 9251 are separated by 370 nucleotides9251 and 9252 are separated by 2257 nucleotides9252 and 9253 are separated by 118 nucleotides9253 and 9254 are separated by 512 nucleotides9254 and 9255 are separated by 1028 nucleotides9255 and 9256 are separated by 200 nucleotides9256 and 9257 are separated by 986 nucleotides9257 and 9258 are separated by 120 nucleotides mRNA_880: 9248 - K10632 BRAP BRCA1-associated protein, at 2,101,842 to 2,104,437 9248 mRNA_881: 9249 - KOG4626 O-linked N-acetylglucosamine transferase OGT, at 2,104,561 to 2,105,712 9249 mRNA_882: 9250 - K07390 grxD, GLRX5 monothiol glutaredoxin, at 2,105,790 to 2,106,591 9250 mRNA_883: 9251 - Hypothetical Protein, at 2,106,962 to 2,108,755 9251 mRNA_884: 9252 - Hypothetical Protein, at 2,111,013 to 2,111,465 9252 mRNA_885: 9253 - K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12, at 2,111,584 to 2,117,077 9253 mRNA_886: 9254 - KOG2504 Monocarboxylate transporter, at 2,117,590 to 2,119,437 9254 mRNA_887: 9255 - K04409 PAK1 p21-activated kinase 1, at 2,120,466 to 2,123,959 9255 mRNA_888: 9256 - KOG1773 Stress responsive protein, at 2,124,160 to 2,125,041 9256 mRNA_889: 9257 - HMMPfam-Ribonuclease III domain-PF00636,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 2,126,028 to 2,126,699 9257 mRNA_890: 9258 - HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065, at 2,126,820 to 2,127,805 9258
Locus Name Description Strand Phenotype
mRNA_880 9248 K10632 BRAP BRCA1-associated protein + cofit
mRNA_881 9249 KOG4626 O-linked N-acetylglucosamine transferase OGT - cofit
mRNA_882 9250 K07390 grxD, GLRX5 monothiol glutaredoxin + no data
mRNA_883 9251 Hypothetical Protein - no data
mRNA_884 9252 Hypothetical Protein - cofit
mRNA_885 9253 K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12 + cofit
mRNA_886 9254 KOG2504 Monocarboxylate transporter + cofit
mRNA_887 9255 K04409 PAK1 p21-activated kinase 1 + cofit
mRNA_888 9256 KOG1773 Stress responsive protein - cofit
mRNA_889 9257 HMMPfam-Ribonuclease III domain-PF00636,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065 - cofit
mRNA_890 9258 HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065 - cofit

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