Gene info for mRNA_890 in Rhodosporidium toruloides IFO0880

Name: 9258
Annotation: HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065
Type 1: Protein-coding gene
Located on scaffold scaffold_1, - strand, nucleotides 2,126,820 to 2,127,805
See nucleotide sequence around mRNA_890 or for all of scaffold scaffold_1

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9253 and 9254 are separated by 512 nucleotides9254 and 9255 are separated by 1028 nucleotides9255 and 9256 are separated by 200 nucleotides9256 and 9257 are separated by 986 nucleotides9257 and 9258 are separated by 120 nucleotides9258 and 9259 are separated by 327 nucleotides9259 and 9260 are separated by 456 nucleotides9260 and 9261 are separated by 1659 nucleotides9261 and 9262 are separated by 350 nucleotides9262 and 9263 are separated by 81 nucleotides mRNA_885: 9253 - K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12, at 2,111,584 to 2,117,077 9253 mRNA_886: 9254 - KOG2504 Monocarboxylate transporter, at 2,117,590 to 2,119,437 9254 mRNA_887: 9255 - K04409 PAK1 p21-activated kinase 1, at 2,120,466 to 2,123,959 9255 mRNA_888: 9256 - KOG1773 Stress responsive protein, at 2,124,160 to 2,125,041 9256 mRNA_889: 9257 - HMMPfam-Ribonuclease III domain-PF00636,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 2,126,028 to 2,126,699 9257 mRNA_890: 9258 - HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065, at 2,126,820 to 2,127,805 9258 mRNA_891: 9259 - K01405 PRD1 saccharolysin, at 2,128,133 to 2,130,693 9259 mRNA_892: 9260 - K11827 AP2S1 AP-2 complex subunit sigma-1, at 2,131,150 to 2,131,840 9260 mRNA_893: 9261 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 2,133,500 to 2,134,793 9261 mRNA_894: 9262 - K01694 TRP tryptophan synthase, at 2,135,144 to 2,138,242 9262 mRNA_895: 9263 - Hypothetical Protein, at 2,138,324 to 2,139,177 9263
Locus Name Description Strand Phenotype
mRNA_885 9253 K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12 + cofit
mRNA_886 9254 KOG2504 Monocarboxylate transporter + cofit
mRNA_887 9255 K04409 PAK1 p21-activated kinase 1 + cofit
mRNA_888 9256 KOG1773 Stress responsive protein - cofit
mRNA_889 9257 HMMPfam-Ribonuclease III domain-PF00636,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065 - cofit
mRNA_890 9258 HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065 - cofit
mRNA_891 9259 K01405 PRD1 saccharolysin - cofit
mRNA_892 9260 K11827 AP2S1 AP-2 complex subunit sigma-1 + no data
mRNA_893 9261 HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735 + cofit
mRNA_894 9262 K01694 TRP tryptophan synthase + no data
mRNA_895 9263 Hypothetical Protein + cofit

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