Gene info for mRNA_1138 in Rhodosporidium toruloides IFO0880

Name: 9506
Annotation: K12598 MTR4, SKIV2L2 ATP-dependent RNA helicase DOB1
Type 1: Protein-coding gene
Located on scaffold scaffold_10, + strand, nucleotides 495,296 to 498,898
See nucleotide sequence around mRNA_1138 or for all of scaffold scaffold_10

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9501 and 9502 are separated by 353 nucleotides9502 and 9503 are separated by 80 nucleotides9503 and 9504 are separated by 164 nucleotides9504 and 9505 are separated by 419 nucleotides9505 and 9506 are separated by 462 nucleotides9506 and 9507 are separated by 556 nucleotides9507 and 9508 overlap by 9 nucleotides9508 and 9509 are separated by 241 nucleotides9509 and 9510 are separated by 132 nucleotides9510 and 9511 are separated by 362 nucleotides mRNA_1133: 9501 - Hypothetical Protein, at 485,139 to 486,293 9501 mRNA_1134: 9502 - K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B, at 486,647 to 489,747 9502 mRNA_1135: 9503 - K04532 NAE1, APPBP1 amyloid beta precursor protein binding protein 1, at 489,828 to 492,159 9503 mRNA_1136: 9504 - Hypothetical Protein, at 492,324 to 493,013 9504 mRNA_1137: 9505 - KOG2363 Protein subunit of nuclear ribonuclease P (RNase P), at 493,433 to 494,833 9505 mRNA_1138: 9506 - K12598 MTR4, SKIV2L2 ATP-dependent RNA helicase DOB1, at 495,296 to 498,898 9506 mRNA_1139: 9507 - KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily, at 499,455 to 501,152 9507 mRNA_1140: 9508 - Hypothetical Protein, at 501,144 to 502,364 9508 mRNA_1141: 9509 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 502,606 to 503,454 9509 mRNA_1142: 9510 - K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta, at 503,587 to 505,304 9510 mRNA_1143: 9511 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 505,667 to 510,461 9511
Locus Name Description Strand Phenotype
mRNA_1133 9501 Hypothetical Protein + insig.
mRNA_1134 9502 K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B - cofit
mRNA_1135 9503 K04532 NAE1, APPBP1 amyloid beta precursor protein binding protein 1 + no data
mRNA_1136 9504 Hypothetical Protein - cofit
mRNA_1137 9505 KOG2363 Protein subunit of nuclear ribonuclease P (RNase P) - no data
mRNA_1138 9506 K12598 MTR4, SKIV2L2 ATP-dependent RNA helicase DOB1 + no data
mRNA_1139 9507 KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily + insig.
mRNA_1140 9508 Hypothetical Protein - cofit
mRNA_1141 9509 ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257 + cofit
mRNA_1142 9510 K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta - no data
mRNA_1143 9511 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit

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