Gene info for mRNA_1162 in Rhodosporidium toruloides IFO0880

Name: 9530
Annotation: SUPERFAMILY--SSF52047
Type 1: Protein-coding gene
Located on scaffold scaffold_10, - strand, nucleotides 547,799 to 548,923
See nucleotide sequence around mRNA_1162 or for all of scaffold scaffold_10

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9525 and 9526 are separated by 514 nucleotides9526 and 9527 are separated by 675 nucleotides9527 and 9528 are separated by 32 nucleotides9528 and 9529 are separated by 444 nucleotides9529 and 9530 are separated by 403 nucleotides9530 and 9531 are separated by 442 nucleotides9531 and 9532 are separated by 836 nucleotides9532 and 9533 are separated by 430 nucleotides9533 and 9534 are separated by 415 nucleotides9534 and 9535 are separated by 526 nucleotides mRNA_1157: 9525 - K14818 SQT1 ribosome assembly protein SQT1, at 531,850 to 533,484 9525 mRNA_1158: 9526 - Hypothetical Protein, at 533,999 to 537,881 9526 mRNA_1159: 9527 - HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540, at 538,557 to 540,883 9527 mRNA_1160: 9528 - KOG4159 Predicted E3 ubiquitin ligase, at 540,916 to 543,538 9528 mRNA_1161: 9529 - K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1, at 543,983 to 547,395 9529 mRNA_1162: 9530 - SUPERFAMILY--SSF52047, at 547,799 to 548,923 9530 mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549,366 to 551,873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552,710 to 552,960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553,391 to 554,372 9533 mRNA_1166: 9534 - KOG2533 Permease of the major facilitator superfamily, at 554,788 to 557,060 9534 mRNA_1167: 9535 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 557,587 to 560,660 9535
Locus Name Description Strand Phenotype
mRNA_1157 9525 K14818 SQT1 ribosome assembly protein SQT1 + no data
mRNA_1158 9526 Hypothetical Protein + insig.
mRNA_1159 9527 HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540 + cofit
mRNA_1160 9528 KOG4159 Predicted E3 ubiquitin ligase - cofit
mRNA_1161 9529 K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1 - no data
mRNA_1162 9530 SUPERFAMILY--SSF52047 - cofit
mRNA_1163 9531 KOG1378 Purple acid phosphatase + cofit
mRNA_1164 9532 Hypothetical Protein + cofit
mRNA_1165 9533 HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920 + cofit
mRNA_1166 9534 KOG2533 Permease of the major facilitator superfamily - cofit
mRNA_1167 9535 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - cofit

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