Gene info for mRNA_1165 in Rhodosporidium toruloides IFO0880

Name: 9533
Annotation: HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920
Type 1: Protein-coding gene
Located on scaffold scaffold_10, + strand, nucleotides 553,391 to 554,372
See nucleotide sequence around mRNA_1165 or for all of scaffold scaffold_10

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9528 and 9529 are separated by 444 nucleotides9529 and 9530 are separated by 403 nucleotides9530 and 9531 are separated by 442 nucleotides9531 and 9532 are separated by 836 nucleotides9532 and 9533 are separated by 430 nucleotides9533 and 9534 are separated by 415 nucleotides9534 and 9535 are separated by 526 nucleotides9535 and 9536 are separated by 223 nucleotides9536 and 9537 are separated by 523 nucleotides9537 and 9538 are separated by 28 nucleotides mRNA_1160: 9528 - KOG4159 Predicted E3 ubiquitin ligase, at 540,916 to 543,538 9528 mRNA_1161: 9529 - K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1, at 543,983 to 547,395 9529 mRNA_1162: 9530 - SUPERFAMILY--SSF52047, at 547,799 to 548,923 9530 mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549,366 to 551,873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552,710 to 552,960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553,391 to 554,372 9533 mRNA_1166: 9534 - KOG2533 Permease of the major facilitator superfamily, at 554,788 to 557,060 9534 mRNA_1167: 9535 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 557,587 to 560,660 9535 mRNA_1168: 9536 - K01474 hyuB N-methylhydantoinase B, at 560,884 to 563,023 9536 mRNA_1169: 9537 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 563,547 to 566,148 9537 mRNA_1170: 9538 - K09531 DNAJC11 DnaJ homolog subfamily C member 11, at 566,177 to 568,431 9538
Locus Name Description Strand Phenotype
mRNA_1160 9528 KOG4159 Predicted E3 ubiquitin ligase - cofit
mRNA_1161 9529 K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1 - no data
mRNA_1162 9530 SUPERFAMILY--SSF52047 - cofit
mRNA_1163 9531 KOG1378 Purple acid phosphatase + cofit
mRNA_1164 9532 Hypothetical Protein + cofit
mRNA_1165 9533 HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920 + cofit
mRNA_1166 9534 KOG2533 Permease of the major facilitator superfamily - cofit
mRNA_1167 9535 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - cofit
mRNA_1168 9536 K01474 hyuB N-methylhydantoinase B - insig.
mRNA_1169 9537 K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing) + cofit
mRNA_1170 9538 K09531 DNAJC11 DnaJ homolog subfamily C member 11 - cofit

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