Gene info for mRNA_1170 in Rhodosporidium toruloides IFO0880

Name: 9538
Annotation: K09531 DNAJC11 DnaJ homolog subfamily C member 11
Type 1: Protein-coding gene
Located on scaffold scaffold_10, - strand, nucleotides 566,177 to 568,431
See nucleotide sequence around mRNA_1170 or for all of scaffold scaffold_10

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9533 and 9534 are separated by 415 nucleotides9534 and 9535 are separated by 526 nucleotides9535 and 9536 are separated by 223 nucleotides9536 and 9537 are separated by 523 nucleotides9537 and 9538 are separated by 28 nucleotides9538 and 9539 are separated by 120 nucleotides9539 and 9540 are separated by 372 nucleotides9540 and 9541 are separated by 206 nucleotides9541 and 9542 are separated by 501 nucleotides9542 and 9543 are separated by 484 nucleotides mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553,391 to 554,372 9533 mRNA_1166: 9534 - KOG2533 Permease of the major facilitator superfamily, at 554,788 to 557,060 9534 mRNA_1167: 9535 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 557,587 to 560,660 9535 mRNA_1168: 9536 - K01474 hyuB N-methylhydantoinase B, at 560,884 to 563,023 9536 mRNA_1169: 9537 - K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing), at 563,547 to 566,148 9537 mRNA_1170: 9538 - K09531 DNAJC11 DnaJ homolog subfamily C member 11, at 566,177 to 568,431 9538 mRNA_1171: 9539 - K07277 SAM50, TOB55, bamA outer membrane protein insertion porin family, at 568,552 to 570,961 9539 mRNA_1172: 9540 - KOG2277 S-M checkpoint control protein CID1 and related nucleotidyltransferases, at 571,334 to 573,898 9540 mRNA_1173: 9541 - Hypothetical Protein, at 574,105 to 575,221 9541 mRNA_1174: 9542 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 575,723 to 577,057 9542 mRNA_1175: 9543 - Hypothetical Protein, at 577,542 to 578,636 9543
Locus Name Description Strand Phenotype
mRNA_1165 9533 HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920 + cofit
mRNA_1166 9534 KOG2533 Permease of the major facilitator superfamily - cofit
mRNA_1167 9535 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - cofit
mRNA_1168 9536 K01474 hyuB N-methylhydantoinase B - insig.
mRNA_1169 9537 K01469 OPLAH, OXP1, oplAH 5-oxoprolinase (ATP-hydrolysing) + cofit
mRNA_1170 9538 K09531 DNAJC11 DnaJ homolog subfamily C member 11 - cofit
mRNA_1171 9539 K07277 SAM50, TOB55, bamA outer membrane protein insertion porin family + no data
mRNA_1172 9540 KOG2277 S-M checkpoint control protein CID1 and related nucleotidyltransferases + cofit
mRNA_1173 9541 Hypothetical Protein - insig.
mRNA_1174 9542 K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme + cofit
mRNA_1175 9543 Hypothetical Protein + cofit

Or browse nearby genes

Or see the comparative fitness browser