Gene info for mRNA_1448 in Rhodosporidium toruloides IFO0880

Name: 9816
Annotation: KOG4159 Predicted E3 ubiquitin ligase
Type 1: Protein-coding gene
Located on scaffold scaffold_11, + strand, nucleotides 313,855 to 315,152
See nucleotide sequence around mRNA_1448 or for all of scaffold scaffold_11

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9811 and 9812 are separated by 1103 nucleotides9812 and 9813 are separated by 138 nucleotides9813 and 9814 are separated by 1345 nucleotides9814 and 9815 are separated by 687 nucleotides9815 and 9816 are separated by 2372 nucleotides9816 and 9817 are separated by 377 nucleotides9817 and 9818 are separated by 342 nucleotides9818 and 9819 are separated by 140 nucleotides9819 and 9820 are separated by 479 nucleotides9820 and 9821 are separated by 189 nucleotides mRNA_1443: 9811 - Hypothetical Protein, at 292,058 to 293,115 9811 mRNA_1444: 9812 - KOG4173 Alpha-SNAP protein, at 294,219 to 295,156 9812 mRNA_1445: 9813 - K20045 ITSN intersectin, at 295,295 to 301,799 9813 mRNA_1446: 9814 - BLAST Mucin-17 [Rhizoctonia solani], at 303,145 to 306,587 9814 mRNA_1447: 9815 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 307,275 to 311,482 9815 mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313,855 to 315,152 9816 mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315,530 to 317,378 9817 mRNA_1450: 9818 - K20826 RPAP1 RNA polymerase II-associated protein 1, at 317,721 to 321,691 9818 mRNA_1451: 9819 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 321,832 to 325,764 9819 mRNA_1452: 9820 - K07241 nixA high-affinity nickel-transport protein, at 326,244 to 328,401 9820 mRNA_1453: 9821 - HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443, at 328,591 to 330,027 9821
Locus Name Description Strand Phenotype
mRNA_1443 9811 Hypothetical Protein - cofit
mRNA_1444 9812 KOG4173 Alpha-SNAP protein + cofit
mRNA_1445 9813 K20045 ITSN intersectin - cofit
mRNA_1446 9814 BLAST Mucin-17 [Rhizoctonia solani] + no data
mRNA_1447 9815 ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044 + cofit
mRNA_1448 9816 KOG4159 Predicted E3 ubiquitin ligase + strong
mRNA_1449 9817 K03325 TC.ACR3 arsenite transporter, ACR3 family - cofit
mRNA_1450 9818 K20826 RPAP1 RNA polymerase II-associated protein 1 + cofit
mRNA_1451 9819 K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2 - cofit
mRNA_1452 9820 K07241 nixA high-affinity nickel-transport protein - cofit
mRNA_1453 9821 HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443 - cofit

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